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Information for unigene UN27167
| FASTA Sequence |
| Unigene ID: UN27167 | Length: 1270 |
SSR | | GGGATCTAGTGATGCCTAGCTTCTCTCATACGATGGAGACTCTATACGACGTTGACTCTGTGCAGAGGATCTTGGACCACTTTCTT
GGTACTGATCATCATCAGATCATGACCGTTGGTGGTGGCTCTCCTTGCTCTTCGGTTGATGATGATGGGAACTTGATAGGATCACC
ACAGACGATCACACCGATGACAAAGGTCGCGAAGCTGATCGATGGGTATCTTGCTGAAGTGGCTCCTGATGTTAATCTCAAGCTTC
CAAAGTTTCAGGCTCTAGCTGCTTCTGTTCCTGAGTATGCTAGGCTCTTAGATGATGGTCTCTATCGCGCAATAGACATTTACTTA
AAGCATCATCCGTGGTTAGCAGAAGGAGAAAGAGAGAATCTGTGCAGGTTGTTAGATTGCCAGAAGCTCTCTTTAGAAGCTTGCAC
ACACGCGGCGCAGAACGAGAGGTTGCCACTAAGAGTAATCGTACAAGTGCTCTTCTTTGAGCAGCTTCAGCTTAGGACCTCTGTAG
CGGGATGCTTCCTGGTTTCAGACAACTTAGATGGCGGGTCAAGGCAGTTAAGAAGCGGCGGGTTTGCTGGAGGAGGAGGATCATCA
ACAGAAGGAGGAGGAGGAGGATGGGCGACGGCAGTGAGAGAGAATCAAGTGTTGAAAGTTGGGATGGACAGTATGAGGATGAGGGT
TTGCGAGCTGGAGAAAGAGTGTTCGAATATGAGACAGGAGATTGAGAAACTCGGTGGTGGTAAGACGACGAGTAAGGTTGGTGGTG
GTGGCAAGACGTGGGAGAATGTTTCTAAGAGACTCGGGTTTGGTATTAAGCTGAAGTCGCATCAGATGTGCAGTGCGCAAGAAGGG
TCGGTGTCCAAGTCTAATAGTGAGAATGTGAAGATAGAGAAGCTTAAGGATGTGAAAGAACGTCGTGGGAAGCATAAGAAAGCTTC
CAGCATTATTAGTTTTGAAAGGTGATGAACAATGGTTAAAATAAATTTTAAGAAGGAAAAACAGAGCTTCTATTGTTAACAAGGTG
TGCATTGTAGTCAGAGTGGTGCTCGTTCTCAAGTGTTGTTTTCAATTTGTCTATGTATTGTTTTCTTTAACGACCAAACTATTTTC
TTGTCATTATTAATTTTTAGTTGGAACTTATTAAGGAGGTTAACAAAAAAAAAAAAACAAATATGCTGAGAAATCTAGAGTGTGGA
TGTCAATAATTTTGATACTTATAAGATTTAACCAAAAAATACTTGTCCCTTTCGTATATATTGACA
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| BAJ34601 unnamed protein product [Thellungiella halophila] | 1457 | 4e-159 |
| XP_002890870 phototropic-responsive NPH3 family protein [Arabidopsis lyrata subsp. lyrata] | 1444 | 1e-157 |
| NP_174332 Phototropic-responsive NPH3-like protein [Arabidopsis thaliana] | 1430 | 5e-156 |
| AAF19742 Contains a bZIP transcription factor PF|00170 domain. ESTs gb|R30400, gb|AA650964, gb|AI994521 come from this gene [Arabidopsis thaliana] | 1430 | 5e-156 |
| ABN08065 BTB/POZ; Superoxide dismutase, copper/zinc binding; NPH3 [Medicago truncatula] | 986 | 2e-104 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9S9Q9 BTB/POZ domain-containing protein At1g30440 | 1430 | 2e-157 |
| Q9FMF5 Root phototropism protein 3 | 423 | 1e-040 |
| Q5KS50 Coleoptile phototropism protein 1 | 411 | 3e-039 |
| Q9FKB6 BTB/POZ domain-containing protein At5g48800 | 405 | 2e-038 |
| Q682S0 Root phototropism protein 2 | 278 | 9e-024 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| A2Q365 BTB/POZ; Superoxide dismutase, copper/zinc binding; NPH3 | 986 | 1e-104 |
| B9SKU3 Root phototropism protein, putative | 967 | 2e-102 |
| C5WR83 Putative uncharacterized protein Sb01g013680 | 963 | 5e-102 |
| C0P413 Putative uncharacterized protein | 956 | 3e-101 |
| A5B9R9 Putative uncharacterized protein | 939 | 3e-099 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G30440.1 phototropic-responsive NPH3 family protein | 1430 | 2e-158 |
| AT5G03250.1 phototropic-responsive NPH3 family protein | 558 | 3e-057 |
| AT3G44820.1 protein binding / signal transducer | 509 | 1e-051 |
| AT5G13600.1 phototropic-responsive NPH3 family protein | 470 | 4e-047 |
| AT1G03010.1 phototropic-responsive NPH3 family protein | 450 | 9e-045 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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