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Information for unigene UN27224
| FASTA Sequence |
| Unigene ID: UN27224 | Length: 1019 |
SSR | | TTTTTTTTATCCTTGCTCGGTCCTGATTGCGCAAATTGGGAGTTGAATTGGATGTTGTTAGTGTTGTGCCTTTCTTTGTTTTTGTT
TGTAGGTTTATGTTTTTTTCTGCTGATGGTTTGGATTTGTTGAAATCAGATCGAATTAGTGACAGATTTTCCTGTCTTGTTTTGTT
TTGACTGGAAATGGATTTAATGTGTGTGTGTGGGAGAGTTTGATGGAGAGGAATCGGTTCATCGTGCGTCTATCAGAGAATCTCGT
GTTCTGAGTCCTCTCCGGGGAGATGCGTCCTTTGACCCTACGAAGAACAAGGACCACGAGTGGGGATACGCGACGGTGAAGTTGGG
AGAAGTCAGCGTGGAGAAGCCGACCTTGTACTCTGATGATAAAGGAGCTTGTGTTTCTCCCCAGGCCTTCAGAACATTGACTTACT
CCGGGAAGATGAAAGTTAATTTCGATGTCTGAAGTGTTCGTTAAGAAAGTGGTTAAAAGAGACAAGTTCAAGACGAGTATGTCGAG
AGGAAGATCCTGTCTAAGAAGATGCAGGACATCCCTATTGGTAGGATACCCGTGATGGTGAGGTCTCTGCTTTGCAACTCAACGGA
AGACACTCAGGTCACAAACGAAGAGTCTGTGGACGTTGGAAACCAGCCAAATGATTTAAGCCTTGCCCCACTCTCACCTGGAGTCA
GGAGTTGTGTTCCTCCCTCCGTGGTGAGGAAGTAGTGTCAACCATCAACCTTGGCTTCACCGTCACTGCTTTGGCCGTAACACCTC
ATGGAACCGAAGCTATTAGACACAATACTCTCTGTTGAGTCTTATATTTATGGCTTATCAGATTACTGATAGAGACGTGGAGTTGA
GATTGTGGCTTCTCTTCTTTGCTCAGTGATCGTTGAATGATTTTGGCTTCTGATATATGATTCACTTGAGGTGGGCACTGATTCTG
AATAAAATTCCCTGTGCTCATTTTAATATATTTATGTGTGTAATTTATAACGACATGATTATATATGTTTGGC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_189020 nuclear RNA polymerase D2A [Arabidopsis thaliana] | 245 | 1e-018 |
| XP_002885593 hypothetical protein ARALYDRAFT_898915 [Arabidopsis lyrata subsp. lyrata] | 242 | 2e-018 |
| XP_002883108 NRPD2a [Arabidopsis lyrata subsp. lyrata] | 236 | 1e-017 |
| XP_002515428 DNA-directed RNA polymerase subunit, putative [Ricinus communis] | 179 | 4e-011 |
| Swiss-Prot top hits | Score | e value |
|---|
| No hits found | | |
| TrEMBL top hits (Blast detail) | Score | e value |
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| Q9LK40 DNA-directed RNA polymerase | 245 | 7e-019 |
| B9RNV9 DNA-directed RNA polymerase | 179 | 3e-011 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G23780.1 NRPD2A; DNA binding / DNA-directed RNA polymerase | 245 | 4e-021 |
| AT3G18090.1 NRPD2b; DNA binding / DNA-directed RNA polymerase/ ribonucleoside binding | 124 | 4e-007 |
| AT3G18060.1 transducin family protein / WD-40 repeat family protein | 117 | 3e-006 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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