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Information for unigene UN27257
| FASTA Sequence |
| Unigene ID: UN27257 | Length: 913 |
SSR | | GGGGCTAATAATATTGAAGAAATGTTACCAAAATGTCTACCGAGGAAGGCATATACTACTCCAGTTTCACTGGATTTGAGCCGTAA
TGAAGATATCAAAACCATTCCAGACTGCATCAAACATATCTCTCAACTTCATAAGCTTGTTATTGGAGAATGCAGGAAGCTCACGT
CACTTCCACAGCTTCCAGAATCGCTTTCAGAGCTAAATGCACAAGAGTGTGCGTCGCTTGAGAGAATACATGGTTCGTTTCACAAT
CCAGGCATCTGTCTCAATTTTGCAAACTGCTTGAGACTCAGCAGCGAAGCGAGAGAGCTCATATGTGCATCACCTAGCAGATACGC
AATCTTACCTGTTGAAGAAGCAGTGGTACAAAAACCCTTTCCTCGATTCTTGAGATATAACTATAAGGCTTGCATTAGGCTTGTGG
CTCGGTCAGCTGTCTATGACGATGACTCTGGTGGTATTGCTCGTGTAGCTTGTTGCATCAGGCGCAAATGCGATGGCAGTGTTGTG
AGAGATGAATCGAGACAGTCACACATACCTGTACTTGTGATAGATCATCTCTTTACATTTGGAGGTTCTTTGATCCTAAACAAAGG
CAATGAACCTGAAGTAGATGCAACATTCAGCGAGCTTATGTTCGATTTCAAGGCCAACATTAAAATGGAGATTATAGGATGTCATT
TTACAGTTCTTGGGGGCAAAGGGGACTATGCTACATATTCTAGATGGAATGAAGAAGCTTCAAGGCTGCAAGATTAAAAATAAATA
AATAAATAAATAAATAAAAAGATAAAGCCATGAAACAGAGAACAAAGATAGGATCCTCAATGAAGAAGATTGTTCTGTTTTTTGAA
TTTAGTAAGTTGTTGTTACATATTTTTATAAGATCCAAACGTTTATTTTATCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| ACP30568 disease resistance protein [Brassica rapa subsp. pekinensis] | 577 | 3e-057 |
| NP_197338 TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana] | 321 | 1e-027 |
| ACP30575 disease resistance protein [Brassica rapa subsp. pekinensis] | 292 | 3e-024 |
| ABB00891 disease resistance protein [Arabidopsis thaliana] | 281 | 5e-023 |
| NP_197336 TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana] | 281 | 5e-023 |
| Swiss-Prot top hits | Score | e value |
|---|
| No hits found | | |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| D1GEC6 Disease resistance protein | 577 | 2e-057 |
| Q3E9F3 Putative uncharacterized protein At5g18370.1 | 321 | 9e-028 |
| D1GED3 Disease resistance protein | 292 | 2e-024 |
| Q38JY5 Disease resistance protein (Fragment) | 281 | 4e-023 |
| Q38JX7 Disease resistance protein (Fragment) | 279 | 6e-023 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G18370.1 disease resistance protein (TIR-NBS-LRR class), putative | 321 | 5e-030 |
| AT5G18350.1 ATP binding / nucleoside-triphosphatase/ nucleotide binding / protein binding / transmembrane receptor | 281 | 2e-025 |
| AT5G11250.1 disease resistance protein (TIR-NBS-LRR class), putative | 235 | 5e-020 |
| AT3G25510.1 disease resistance protein (TIR-NBS-LRR class), putative | 232 | 1e-019 |
| AT1G65850.1 disease resistance protein (TIR-NBS-LRR class), putative | 225 | 7e-019 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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