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Information for unigene UN27275
| FASTA Sequence |
| Unigene ID: UN27275 | Length: 1203 |
SSR | | GGGAGTTTCGATCGCCCTCTCTCTCCCAACAGAGAAAGAAAGCTTCGAGCTCGAGAGAGAATCCATGGATTCCTCGCCGGTTCAGA
GTCGGTTCGATATATTCGAAATATATCGCAGATTTTGTGAGACTCGATCAAGTCAAGCTTTATGTCCTATTTATAAACACGACGAG
GAATCACACAGAAGTAATAATTATTCTAAAGAAGCTTTAACTCACCTCTTTATTCTAGTCGAGACCAAGTTTCAGGCAAGAAACTC
CATTTTTGATGAATTGTTCAAGTTGATGTCACGTCTGGACTTAATGGCAAGTTTTTCTTCTTATCTTGACCAGCTGCCCTGTGATC
TAACCCTTTTTGATTTTGTTCTTCTTTTTGTAGGTGGACTTCTCCGAGTTTACCCGCTTTTATGATTTTGTGTTCTTTATGTGCCG
TGAGAATGGGCAGAAGAGTATAACTGTATCTAAAGCTATTACCGCATGGAAACTTGTTTTGGTTGGGAGATTTAGATTACTTAACC
GCTGGTGTGACTTCATCGAGAAAAATCAACGGCACAATATTTCAGAAGATACATGGCAACAAGTCTTGGCGTTTAGTCGTTGTGTA
CATGAGAATCTCGAAGGATATGACTCTGAAGGTGCGTGGCCTGTCCTCATCGATGAATTTGTTGAGCATATGTACAGTGTTCTAGG
ACCGAGTAAGAACAACACTAGCTTGTCCTGTAACTGTGGGGACACAGACTCTGAATCATGCGTTTACGAAGATCCTCTTTCAGATA
AGCATCATAAAGATGATCGCCGCTACCACACGGGTTTAAGAAGTGTTCCAGGCTTAAAGAGAAAAACATCCAAAGACTACGATGAA
GAAGAAGAAGAAGATGATGATGAAGAAGTATCTAAAAGTCGATACTCTTTTTCTTCACCATACTTGAAACGAATGAGATCATCCGA
GGACAGTCCAAGATGTTCATCCAACTCGCATTGTATGATTGAGCGAAGTCTCTCACAAGGATTTGCAAGTCTTTTATCGACTGGAG
ATAAGCCGTGAAACTCAAGAAACCATCACACATAAGCAAAATAGATTATATACTAGAAAACAAAAAGAGGTCTCGAGTTAACGGTG
GGTTCTTATTTGTTGTGAGCTATATAATATTTGTTTCCCAATCTATTTATACCCTTGTTTCCATTACATTTTCGAGTTTCAGAGC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_189539 uncharacterized protein [Arabidopsis thaliana] | 875 | 1e-091 |
| XP_002877147 hypothetical protein ARALYDRAFT_347271 [Arabidopsis lyrata subsp. lyrata] | 846 | 3e-088 |
| XP_002531855 conserved hypothetical protein [Ricinus communis] | 651 | 1e-065 |
| CAN79787 hypothetical protein VITISV_033333 [Vitis vinifera] | 578 | 3e-057 |
| XP_002283688 PREDICTED: hypothetical protein [Vitis vinifera] | 577 | 4e-057 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9VUQ8 DCN1-like protein | 251 | 1e-020 |
| Q6PH85 DCN1-like protein 2 | 243 | 9e-020 |
| Q5ZKU1 DCN1-like protein 1 | 234 | 1e-018 |
| Q96GG9 DCN1-like protein 1 | 234 | 1e-018 |
| Q9QZ73 DCN1-like protein 1 | 234 | 1e-018 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9MBG8 Genomic DNA, chromosome 3, TAC clone:K5K13 | 875 | 8e-092 |
| B9T0T6 Putative uncharacterized protein | 651 | 7e-066 |
| A5C832 Putative uncharacterized protein | 578 | 2e-057 |
| B9IJZ0 Predicted protein | 565 | 7e-056 |
| B6TMX2 Putative uncharacterized protein | 459 | 1e-043 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G28970.1 AAR3 (antiauxin-resistant 3) | 905 | 1e-097 |
| AT3G12760.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Defective in cullin neddylation (InterPro:IPR014764), Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Protein of unknown function DUF298 (InterPro:IPR005176), UBA-like (InterPro:IPR009060); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G15860.2); Has 628 Blast hits to 626 proteins in 138 species: Archae - 0; Bacteria - 0; Metazoa - 408; Fungi - 99; Plants - 64; Viruses - 0; Other Eukaryotes - 57 (source: NCBI BLink). | 249 | 2e-021 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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