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Information for unigene UN27303

FASTA Sequence
Unigene ID: UN27303Length: 980 SSR 
GGTTAAACCAGTATTATTAAAACTGAACCAATTACAAACGAAAACCTGAAACCCAAGTACACCAGATCAGCACACAAAAGGCAACA
AGATCTGCATACGAAAGATAGGTATTCAAAGCAAAAGTTTTATCACAAAGTTCCGCAGCATCGAAAAACGATATAACCGACCAGAA
AAATATCCTTTCTAATGGGACTGACAGGCAAATCACTCCAGTTAACTCCGTAAACTTATATCTAACGGGGCTGAAAAAGCAACTTC
TCTTTTGGATCTTTGTTCTGACTTAGCGGAAAAAAAGTGGAACAGATCGTTTAGGTACTTTGCCTTCCAGCTTAAGTCTCCTATAA
GACTCTCTGATATGGCAAGGTCTGATAGGTCCTGAGTCGTTCCTTTCCCCCATTACAACTCTAGCTGTTTCCACTAGTTCACCAAC
AAACATCTTCGCTATACCACAGTTCACAATTATAACTGGCATACTGATCTTCTGACTCCCTGTCACTCCCTGTAATAACTTCCTCA
TGTTTCCTTTTTGAAATGCAGATCTCCTAAAAGATTCATATCTGCTCATTTGATCCTCAGTGAACTGCGACAAAATGACCTGCATC
TTAGCCATCTTAGCGGGATCAACAGTAGTTGGATACTTGGTTAACTCAGCTTCCATATTCTCTTCCTCCTCTTCTTCATCTTCATC
TTTGTTCTTCCCTTCAGCAACAACAACAACGGAGGAGGAGGTTTTAGACTTCTTGCTCTGACGGCGAACACCACCCACGTCTCTCT
CACTCTCCTCCGGAGCCTGGTCCATTTCAATCCGTCCCTCTTCATCGCCTCCGCCTCCGGGTGATTCCGGCGGTGATTCGTCTTGC
TCCTCCTCCTCCTCTATCGCTGCTTCAAACGGATCCTTCGAATGCTTCATTTTTTCCTGAAAACCTTTGATACTCGGATCCGATTT
TCAAGAGGCCCGCAGCGCAACTGGGAAGCTCCCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002869942 predicted protein [Arabidopsis lyrata subsp. lyrata]8051e-083
NP_193761 transcription initiation factor TFIID subunit D9 [Arabidopsis thaliana]7914e-082
CAA18253 putative protein [Arabidopsis thaliana]5952e-059
XP_002456149 hypothetical protein SORBIDRAFT_03g031220 [Sorghum bicolor]5764e-057
XP_002277017 PREDICTED: hypothetical protein [Vitis vinifera]5692e-056

Swiss-Prot top hits (Blast detail)Scoree value
Q99JX1 Transcription initiation factor TFIID subunit 112705e-023
Q15544 Transcription initiation factor TFIID subunit 112689e-023
Q5RA91 Transcription initiation factor TFIID subunit 112689e-023
Q54XM9 Transcription initiation factor TFIID subunit 112616e-022
Q5U1X0 Transcription initiation factor TFIID subunit 112562e-021

TrEMBL top hits (Blast detail)Scoree value
Q9M565 Putative TATA binding protein associated factor 24kDa subunit7913e-082
O65441 Putative uncharacterized protein AT4g202805952e-059
C5XGR0 Putative uncharacterized protein Sb03g0312205763e-057
B6U2E9 Transcription initiation factor TFIID subunit 115638e-056
B8A7K9 Putative uncharacterized protein5611e-055

Arabidopsis top hits (Blast detail)Scoree value
AT4G20280.1 TAF11 (TBP-ASSOCIATED FACTOR 11); DNA binding / RNA polymerase II transcription factor/ transcription initiation factor7921e-084
AT1G20000.1 TAF11b (TBP-ASSOCIATED FACTOR 11b); DNA binding / RNA polymerase II transcription factor/ transcription initiation factor4094e-040

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
72  100%

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