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Information for unigene UN27317

FASTA Sequence
Unigene ID: UN27317Length: 965 SSR 
GCTTGAAGATCCGTATCAACATGCCTTCTTCCCCCATGAATCCAACAAAACCTTTCTCATGAATCTCTCAAAATATTATCCTCTCT
CTCTCTCTCTCTGAAAGAAAAATATTTTAATTGCAAAAAGACTCTCTTCTTCGTTCCCATCATCACCATGACGCTGGATAGTTACA
ACGGCGATGTTCACACCGTACCTCAATCGGAGAACTCGCCGATCGACACCGACAAAGATAGAGAGCTGTTCGTGCCGCCGCTCAAC
TTCGCCATGGTTGATAACGGAATCTTCCGCTCCGGTTTTCCTGAACCGGTTAGTTTCAGCTTCCTCCAGTCCCTGCGACTCCGATC
CATCATATACTTGTGCCCTGAGCCATACCCAGAGGTGAATGTAGAGTTTGCGAAGTCCAATGGGATCCACGTGTTTCAGTTTGGAA
TCGAAAGATGCAAGGAGCCCTTTGTTAATATACCGGACCAAGTTATCCGAGAAGCATTACAAGTACTCCTAGATACAGAGAATCAT
CCTGTCTTAATCCATTGCAGAAGTGGCAAGCATCGGACTGGATGTCTAGTGGGGTGTGTGAGGAAGATACAGAGATGGTGTTTGTC
TTCCATTTTCGACGAGTACCAGAGATTTGCAGCTTCCAAAGCTAGAATCTCTGACCAGAGATTCATGGAGCTCTTTGACATCTCCA
ATTTAAGACATTCACCACTCTCCTTCTCATGCTCCAAGAGGTGTTGATCACTGTAAACGAAACCTACAACTTAAATAAATAGTTGT
TGAATGTCTTGAAAAGTCTCTTTAGCTAGATGAAAAATCATTCAAATAAAAAAAACCCTTTCATTGCAATGTAAATAAATAAACAT
TGTAGGGTTTTTCTAGAGAGAAAATTTTTATAGGCTTGGTTACAAGACTCTCCATTTAAACGCTATCATCATGTAGAACAAGTTTT
ATCATAAAGTCTTTTTACC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_567261 tyrosine specific protein phosphatase family protein [Arabidopsis thaliana]9026e-095
XP_002872675 tyrosine specific protein phosphatase family protein [Arabidopsis lyrata subsp. lyrata]9018e-095
XP_002317187 predicted protein [Populus trichocarpa]7314e-075
XP_002273080 PREDICTED: hypothetical protein [Vitis vinifera]7208e-074
XP_002275443 PREDICTED: hypothetical protein isoform 1 [Vitis vinifera]7153e-073

Swiss-Prot top hits (Blast detail)Scoree value
Q9ZVN4 Probable tyrosine-protein phosphatase At1g050007061e-073
P53965 Tyrosine-protein phosphatase SIW144354e-042
Q1ZXG8 Probable tyrosine-protein phosphatase DG10603531e-032
Q4P7L6 Putative tyrosine-protein phosphatase OCA13127e-028
Q6C4X9 Putative tyrosine-protein phosphatase OCA13054e-027

TrEMBL top hits (Blast detail)Scoree value
Q940L5 AT4g03960/T24M8_49024e-095
B9HZH6 Predicted protein7313e-075
B9N8H3 Predicted protein7124e-073
B9T828 Tyrosine-protein phosphatase SIW14, putative7124e-073
Q0WS70 Putative uncharacterized protein At1g050007062e-072

Arabidopsis top hits (Blast detail)Scoree value
AT4G03960.1 tyrosine specific protein phosphatase family protein9076e-098
AT1G05000.1 tyrosine specific protein phosphatase family protein7061e-074
AT3G02800.1 phosphatase/ phosphoprotein phosphatase/ protein tyrosine phosphatase5152e-052
AT5G16480.1 tyrosine specific protein phosphatase family protein5043e-051
AT1G05000.2 tyrosine specific protein phosphatase family protein4221e-041

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
102  50%
 
112  50%

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