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Information for unigene UN27337

FASTA Sequence
Unigene ID: UN27337Length: 823 SSR 
GGACTTCAGGGAGCAAATTGATTGAGGGGGAGAGAGAGCCGTACGAATCGGAGATGTCGTCGAACGATACGGATCAGTCGCGGAAG
CGTGCGGCGCCGGGAGACAACAATTGGTTGCCTCCTGGTTGGAGAGTTGAAGATAAAGTTCGAACCTCCGGTGCTACTGCTGGTTC
CGTTGATAAGTACTATTACGAACCAATCACAGGACGTAAGTTTCGATCCAGGACCGAAGTGCTCTACTACTTGGAACATGGGACAG
AAAAAAGAAAGGAAGCAAGAAACCAGACAACACTGATTCCAATTCAGACAATTTCGAAGGGCAAGGAAGCAATAAATCCAGCAGAA
AAGCTAATAAAGAGCAGCCTCCTCCGCCGCCGCGGCCACCATCGCCACCGTTGAAGTTTGATTTTGAGAATCCGCCGGAGAAGGTA
AGCTGGTCTGCTGCGGCAAAAGCAGGAGAGGAAGCTTGGACACCTTTTGTTGGGGACGACAAGGTTCAAGATTCGTTGAGAAGAGA
ATGGTGCACTGCTTTTAACGTTATCACGACCAAGAACCCAACTAAACTGTCGTCGTTGAGACGATGATGATGATGATAGACAAGGT
GGCGTTTTCGTTTTTTGGTTGGTGCATATGTTGTAACATAAACGGGGATGGATGGTAGGAGCTACTTAACCGGGTGATGTTTGCTT
AGTGTTCACATAAGTTAAAGTTAGTTTTGCACTCTAATTTTTCCTAGCTTGTTTTTGAGGGATGTGATAATGGGATGGATACACAT
ATCTGAGTTTGCGTTTAACACGCTATGGATATCGCTTTTTTTTTTGCCG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002864630 hypothetical protein ARALYDRAFT_919168 [Arabidopsis lyrata subsp. lyrata]3505e-031
NP_200746 methyl-CPG-binding domain 6 protein [Arabidopsis thaliana]3192e-027
NP_190242 methyl-CPG-binding domain protein 5 [Arabidopsis thaliana]2861e-023
AAM63666 unknown [Arabidopsis thaliana]2861e-023
XP_002875791 hypothetical protein ARALYDRAFT_485028 [Arabidopsis lyrata subsp. lyrata]2798e-023

Swiss-Prot top hits (Blast detail)Scoree value
Q9Z2E1 Methyl-CpG-binding domain protein 21234e-006
Q9UBB5 Methyl-CpG-binding domain protein 21226e-006

TrEMBL top hits (Blast detail)Scoree value
Q9LTJ1 At5g593803191e-027
Q8LCG6 Putative uncharacterized protein2868e-024
Q9SNC0 Putative uncharacterized protein At3g465802868e-024
B9T3M7 DNA binding protein, putative2267e-017
B9HPH2 Methyl binding domain protein2204e-016

Arabidopsis top hits (Blast detail)Scoree value
AT5G59380.1 MBD6; DNA binding / DNA demethylase/ methyl-CpG binding3197e-030
AT3G46580.1 MBD5 (METHYL-CPG-BINDING DOMAIN PROTEIN 5); DNA binding / methyl-CpG binding2865e-026

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
62  100%

Unigene MembersMember information