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Information for unigene UN27354
| FASTA Sequence |
| Unigene ID: UN27354 | Length: 918 |
SSR | | GGTGATGATGATTGTAATAAAGATTCCAACTTACAGAAGCAGTGAAGTAACGTGGTACATGAGTTTTTTTTGGTATGAGGTTTCTT
TCATTGGTCCTATCTTACAATTATACAAATAAGCTTGCACTCTTTTGATCACAGAGCAGCAAGAGCGTGTAATAAATCTGAAATAG
ATCACCAGAGCTTCTTTAGATGAATCAACCTGTCAGTTCCTCCATTTGCCCCCGAACAATGTAGGGTTCAGCATCAGTTCGTCTAA
GGAAATGCATAAAGTGACGGGTGAAATTTGTTGTCTTGTCACTCATCACTATTCCTTGCTCGATATCTCCCACAACTCTGATCTTG
ATGTATGGATCTTTTGGAGGCACCATATCCACATTCAACTCGATTCCTACTTTACCCATGTATGATGTGATAGCTACGGAATGGTT
CTTGAAGTAGTCTTTCTCGAGTGCGGTGAGCCTCTCTTGGATATCAGGTGGAAGTTCGATAATTTCAAGTCCTATGGTCCACGCCA
GATCACGCACAATGTCTGCTCTATTGTGCACATAGGCCATGAGGCAGCGCTTGTTGCGGATCAAAGAAAGGTGATGAACGAGTGCT
CCATAGTGATCAGCGTTTCTGTTGTCGTGAACATCCAACCCTTCTTGTTGCATTTTCCTTATGAGAGACTGGATGAGATGGTGATT
CTGGTCGCATTCCTCGATAGCCTCGTCAAAGAGCTTGCTATTGAAAGGTTTGAGGTGGCCCATCTCCCCGCTCGCAAAATCTTTAA
TCAGCTGATACCCTTTTCTCCCGTACATGCCCGCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTTTTGTTTACTCTTT
CTGAGAGTACCCGGTAAGAGGGAACGGATCTGCACCGGAACAGCACTTGCGGCGGCCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_178136 GINS complex subunit 1 [Arabidopsis thaliana] | 928 | 5e-098 |
| XP_002889305 hypothetical protein ARALYDRAFT_316941 [Arabidopsis lyrata subsp. lyrata] | 899 | 1e-094 |
| XP_002326120 predicted protein [Populus trichocarpa] | 739 | 4e-076 |
| XP_002517600 partner of sld5, putative [Ricinus communis] | 717 | 2e-073 |
| CBI36282 unnamed protein product [Vitis vinifera] | 599 | 7e-060 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9P7X6 DNA replication complex GINS protein psf1 | 157 | 6e-010 |
| Q12488 DNA replication complex GINS protein PSF1 | 125 | 3e-006 |
| Q6FVY5 DNA replication complex GINS protein PSF1 | 123 | 5e-006 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9SSC0 At1g80190 | 928 | 4e-098 |
| B9MSY7 Predicted protein | 739 | 3e-076 |
| B9RV31 Partner of sld5, putative | 717 | 1e-073 |
| B6THR1 DNA replication complex GINS protein PSF1 | 577 | 2e-057 |
| A2Y5B1 Putative uncharacterized protein | 550 | 2e-054 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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