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Information for unigene UN27392

FASTA Sequence
Unigene ID: UN27392Length: 993 SSR 
AAAGACAAAACGTTTAAAGACAAAAGCTTGTTTCTACATTCATGAAAAATGTGCGAACATTTGCATCAGCAGACAAGAACTCCGTC
CCCAAAACTCTGCCGATTATAATCCAACAACACATGTAGCTGTAGGGAATGAAACATTCCTACTTTGGCACAACTTCTTTGTGAGC
TTTGAATGATAAAATCACATTCCAAGCCAAAGCAACTACGTTGGAAGCCAGTACCTGGAAGTTTTGTGGAACAAATCTGAAGTTAA
GAAACTGAAAAGGAATCCAAAGCTGCCAATTTGCTAGCACTGCACCAGTCCACTCCTGCTTTAGCTTCGGTATGACATTTGATGGT
TTTCCTTCAAGTGTCACAACAGCTGATAAGAAAACTCCAACAAAAACTGGAGCAAAAACGAACTGATCCAGTAAAAGTCGCAAAAC
TGCGCCTGATAGTCCGGAAGCTGTCACCACTTTGCTCAAATACAAGTACCAGAAGTGCAAAGCTGGACCGACAAGCCCTAAGCCCA
AGATGGTAAACGTGAGTGTCCTCTTCTTGTCCAGAGATGAGGTCTTATTGATTGTAAGCTGACAGATCACATCACCAATGAGGGTC
AAAAGTGCTGATGTCGCAGATTTGGTCAAAACAGGATAACCCGAGAGGAGAGCCAAGTACCATGACAGAAATGACCACTTGTTTCC
GTTTCCGCCGCTATCTTCACCTCCACCACCACCACCACCAGAACCTCCACCAATACCGCCGGAATCACCTGAACCTCCACCTGAGA
CCGAAGAGACCCGACCCAGAGGCCCGAACCCAGTCCCGGGACGTTCAGACGAATTGATACGGCCAGAATTCAGTGAACCGTTTCTG
TAACCAAACGAAATAGCTCTACTCGAACCAGCTCCAGTTAGACTCCTTCGGTTGCCATTACCGGAAACACCAAAAGAATTGAACAC
GAGTGGTGTTTTCCGGGCGAAAGTTGCGTGGCTAAGCATCATGGCCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002871905 hypothetical protein ARALYDRAFT_910013 [Arabidopsis lyrata subsp. lyrata]11463e-123
NP_197476 protein Mpv17 [Arabidopsis thaliana]10479e-112
AAL25565 AT5g19750/T29J13_170 [Arabidopsis thaliana]10479e-112
AAM65990 unknown [Arabidopsis thaliana]10352e-110
XP_002308859 predicted protein [Populus trichocarpa]8426e-088

Swiss-Prot top hits (Blast detail)Scoree value
Q54XX9 PXMP2/4 family protein 22633e-022
Q54GD8 PXMP2/4 family protein 32608e-022
Q54FR4 PXMP2/4 family protein 42581e-021
Q2KIN6 Protein Mpv172491e-020
Q06563 Protein SYM11901e-013

TrEMBL top hits (Blast detail)Scoree value
Q93Z42 AT5g19750/T29J13_17010477e-112
Q8L9G1 Putative uncharacterized protein10352e-110
B9HDU1 Predicted protein8424e-088
B9IHK6 Predicted protein8352e-087
B8BLU6 Putative uncharacterized protein7133e-073

Arabidopsis top hits (Blast detail)Scoree value
AT5G19750.1 peroxisomal membrane 22 kDa family protein10895e-119
AT5G43140.1 peroxisomal membrane 22 kDa family protein2472e-021
AT1G54215.1 proline-rich family protein1397e-009
AT4G36230.1 unknown protein1352e-008
AT3G22800.1 leucine-rich repeat family protein / extensin family protein1334e-008

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
111  33%
 
61  33%
 
81  33%

Unigene MembersMember information