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Information for unigene UN27433

FASTA Sequence
Unigene ID: UN27433Length: 905 SSR 
CTGCTCCCTCACCTCGTTCCTCGCGCTCTCTCTCTCTCTCTCTTTCCTTGAGAAACAAGCCACAGTCACAATCGATCTACTCTCTG
ATCTCTCCTATAGTACAATGGTTATTGTCGAGAGCTTCAGCCATGGGGAGCCAGAAACGCCGCGTTTCAGCGACGACCTTGCCTCA
GGCTCAGCTTCCTCCACGCCGTTCGCCAGCGCTCCGTCGAGCCCCGGCCGTGGTCCACCGCCTGGCTATTTCTTCAGCGCGCCGTC
GAGTCCGATGCATCATTTCTTCTTGTCCTCCGCCGCTGCTGCTCCGTCGGAGAGTCCGAAGCTCGATTCTTCGTCTTCTTCTCCCG
GCGACTTCGAGTTCGATTTCTCGTCTCGGTTGTCTTCCAGCAGTGGCGGTGGTCCTCTAGGCGGCGTACCGATGACCTCCGCGGAG
GAGCTCTTCTCCAACGGCCAGATCAAGCCGATGAAGCTCTCTTCCCACCTCGAGAGGCCTCAGGTCTTAGCGCCGCTTCTAGATCT
TGAAACCGAGGAAGAAGACGGTAGGCGTGGGAGGGATCTGATGAAGCTGAGAAGCAGATCTGTTCACCGCAAGGCGAGATCTCTCT
CTCCTCTGCGAAACGCAGCGTATCAATGGAACGAAGAGGAGGAGGAAGGAGAGAGTGAGGTGAAGGAGTGTATTCGGAAGCTACAA
GAAGATTACGAGACTAATAATAAGAGTAACGGAAACGTGACGTCAGCTGAAACGACGCCGTATTGTTCCGCTTCTTCTTCACGGTC
GTCGTCTTACGGAAGAAACTCGAAGAAATGGATTTTCCTCAAGGATCTGCTCCACCGAAGCAAGAGCGAGGGGAGTGGGAACGGCA
AGGAGAAGTTCTGGTCCAACATCTCCTTCTCTCCTTCAGTCTCAA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002878467 hypothetical protein ARALYDRAFT_907836 [Arabidopsis lyrata subsp. lyrata]10333e-110
NP_191822 uncharacterized protein [Arabidopsis thaliana]10308e-110
AAM64482 unknown [Arabidopsis thaliana]10308e-110
CAN74687 hypothetical protein VITISV_020417 [Vitis vinifera]7126e-073
XP_002275068 PREDICTED: hypothetical protein [Vitis vinifera]7126e-073

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q8LBZ0 Putative uncharacterized protein10305e-110
Q9LZK2 Putative uncharacterized protein At3g6263010305e-110
A5BJX8 Putative uncharacterized protein7124e-073
A9NYX3 Putative uncharacterized protein3711e-033
A5C5H5 Putative uncharacterized protein3622e-032

Arabidopsis top hits (Blast detail)Scoree value
AT3G62630.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1645 (InterPro:IPR012442); BEST Arabidopsis thaliana protein match is: calmodulin-binding protein (TAIR:AT2G15760.1); Has 207 Blast hits to 197 proteins in 50 species: Archae - 3; Bacteria - 4; Metazoa - 52; Fungi - 9; Plants - 91; Viruses - 0; Other Eukaryotes - 48 (source: NCBI BLink).10303e-112
AT2G26530.2 AR7811853e-014

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
212  50%
 
192  50%

Unigene MembersMember information