Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN27480

FASTA Sequence
Unigene ID: UN27480Length: 953 SSR 
ACTTTGCTCGGACAAAAAGGCTTACGCGACGCCTCCACTGTCTTTTCTCCGTCTTCTCACACCATTTCGCAAATTCTCAAAAACTT
TACACAACACTTTTTCTCGCTTTCTCAACACCCTAAATCCTCCCGATCTATTACAACCTCCGATCAGAAAACATTCCCCCCCCCCC
CCCGGCGGCGGAGGATGTCGTTTGAGTAATGGTGTGAGAAGTGATTTGTAATCAATGGGCGTAGTAGCTGAGGCGTGGAGGCCGCC
GCCTCAGCTCAACAAGAGCGGCGGCGGCGGCGGCGGGGGGTTATGGAAGTGGTGGAGATCTTTGTTGTTGTCGGGTGGTCAGCACA
AGAGAAGCGTAATGTGGTGGAAATGGGTTTGCGGTTTCATGCTTTTCTCCTTAGCTGTCATCTCTCTCTTCACCGGTCATGTTGTC
TCCCACCTCGAGTGGGCCCAGCAACTAAGCAAACGCAGCTTACTTGATATGAGCCGTAAGGAACCAATTGATGTGTGGAAGTCAAA
GTATTCTAAGTTCTTCTATGGATGCAGTGACAGAGGAAATAACTTCCCACCTGCTGTTCAGGAGCATAAGTCTAATGGGTATTTGC
TGATTGCGGCTAGTGGAGGTCTCAACCAGCAAAGAACAGGAATAACAGATGCAGTGGTTGTTGCACGGATTCTTAATGCTACTCTA
GTTGTACCTGAGTTGGATCACCATTCTTATTGGAAAGATGACAGTGACTTTAACGACGTTTTTGACATTAACTGGTTCATCTCTTC
CCTCGCAAAAGATGTGACTATAGTAAAGAGAGTTCCTGACAGAGTCATGCGCTCCATGGAGAAACCTCCTTACACCATGCGTGTGC
CTCGGAAGTCTACTCCTGGGTATTATCTCGACCAAGTTTTGCCAATTCTCTCGCGGAGACATGTGTTACAATTGACGAAATTTGAC
TACAGAT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002870141 hypothetical protein ARALYDRAFT_493211 [Arabidopsis lyrata subsp. lyrata]10406e-111
NP_567509 O-fucosyltransferase family protein [Arabidopsis thaliana]10155e-108
XP_002530648 conserved hypothetical protein [Ricinus communis]8641e-090
XP_002303356 predicted protein [Populus trichocarpa]8353e-087
CBI37357 unnamed protein product [Vitis vinifera]8094e-084

Swiss-Prot top hits (Blast detail)Scoree value
Q8W486 DUF246 domain-containing protein At1g049102723e-023

TrEMBL top hits (Blast detail)Scoree value
Q8LPF8 AT4g16650/dl4350w10153e-108
B9SXC9 Putative uncharacterized protein8641e-090
B9GYC0 Predicted protein8352e-087
B9MUP9 Predicted protein7465e-077
B8ASY0 Putative uncharacterized protein6766e-069

Arabidopsis top hits (Blast detail)Scoree value
AT4G16650.1 unknown protein10152e-110
AT4G38390.1 unknown protein4515e-045
AT1G20550.1 unknown protein4434e-044
AT1G76270.1 unknown protein4301e-042
AT2G37980.1 unknown protein2956e-027

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
191  33%
 
211  33%
 
101  33%

Unigene MembersMember information