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Information for unigene UN27503
| FASTA Sequence |
| Unigene ID: UN27503 | Length: 1342 |
SSR | | AAAGGGTCTTCGTCAGAAACTGTTACGCGGTCACTCCCGCGGCGGTTGCACGGCGGTTCCCGGGGATGAGGTCTCTGACTCTTAAA
GGGAAGCCTCACTTCGCCGACTACAACTTGGTTCCTGACGGTTGGGGTGGTTACGCTTGGCCGTGGATTGAGGCTATGGCGGAGAA
GAGCCCGTCTCTTGAAGAGTTGAGGTTGAAGAGGATGGTTGTGACTGATGAATGCTTGGAGAAGATCGCTGCTTCTTTCAAGGACT
TTAAGGTTCTTGTGTTGACTTCTTGTGAAGGTTTCTCTACTGATGGTCTTGCAGCCATTGCAGTAGCTTGCAGGTTCGGTTCAAAA
CACACAAATAACCTCTATTCTTTATTTTGGATAATTCAGATTATTTAATAAAAATATTTAGATATTTTAGAATAATTTTGCTTAAT
TCCGGTATATTTTAATATTTTTTAAATATTTTAAGTATTTTTAATATTTTTAATAAAAAATTTAAATATATATATATATATATGAG
TGATTTTGATTAATATTCATAGTAGCACCATATATGAAGAATATAGCCATACATGAAAAGCTGTGTCAATTTGGTACCAAACTAGA
CAACGATCTCTTTTTCAGTGCGTGAGAAATAATTAACATATACTCGATATCATACTATACTATATTTGTCCAATATATAGTACAGA
AAAATTATTTTATAACAACAACTATCATGAAGAGCATGAAGAAAATAAAAAGGTTGAAAAAGATGAAAGGTTTGTAGAGAATACAC
TATACCCTAAACTTAAACTATATACCCAAACTATATACCCTAAATCCAAGCCATATACTCTAAACCGTAAACCCAAACCAAACCAA
AACAATATACCCTAAACCCAAACCCTAACCCAAACCATATACCATAAACCCAAACCATATACCCAAACTATATACCCTAAATCCAC
ACCATATACCCTACACCCTACACCCAAACCAAACCCAAACAATATACCCTAAACCCAAACCTAAACCCAAACTATATACCCAAACC
ATATACCCTACACCAAAACCCCAAACCCTAAACCCAAACCATATACCCAAACTATATACCCTAAACCCAAACCCTATTCCTAAACC
CTATTCCTAAACCCTAAACTCAAACTCTTATCTATTACGTGACTATGCTATACATGTTATGGTATAGAATACTCAACACATCCATA
AACTTTGTATGTATAAAATTCTCCAAAATTTCCTTAGAGAGAAATGATGAGTGGCGACGGTGTTGGAGAACAAAACAGTGTAACTG
ATCAAGTAATGAGTAAGAAGAATCAAGAGGCAGAGAAGGAGATACAAATTCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| BAJ33601 unnamed protein product [Thellungiella halophila] | 546 | 2e-053 |
| XP_002872791 hypothetical protein ARALYDRAFT_490244 [Arabidopsis lyrata subsp. lyrata] | 533 | 6e-052 |
| NP_567255 GRR1-like protein 1 [Arabidopsis thaliana] | 531 | 1e-051 |
| AAK01147 GRR1-like protein 1 [Arabidopsis thaliana] | 529 | 2e-051 |
| AAK76473 putative F-box protein GRR1 protein 1, AtFBL18 [Arabidopsis thaliana] | 527 | 3e-051 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9ZR12 GRR1-like protein 1 | 531 | 4e-053 |
| Q570C0 Protein TRANSPORT INHIBITOR RESPONSE 1 | 452 | 6e-044 |
| Q9LW29 Protein AUXIN SIGNALING F-BOX 2 | 395 | 3e-037 |
| Q9LPW7 Protein AUXIN SIGNALING F-BOX 3 | 391 | 7e-037 |
| Q7XVM8 Transport inhibitor response 1-like protein Os04g0395600 | 385 | 4e-036 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| A4KA30 Transport inhibitor response 1 | 434 | 1e-040 |
| A5AML2 Putative uncharacterized protein | 431 | 3e-040 |
| B9IBT6 F-box family protein | 427 | 8e-040 |
| B9S3W2 TRANSPORT INHIBITOR RESPONSE 1 protein, putative | 425 | 1e-039 |
| B9GFH2 F-box family protein | 421 | 4e-039 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G03190.1 GRH1 (GRR1-LIKE PROTEIN 1); auxin binding / protein binding / ubiquitin-protein ligase | 531 | 4e-054 |
| AT3G62980.1 TIR1 (TRANSPORT INHIBITOR RESPONSE 1); auxin binding / protein binding / ubiquitin-protein ligase | 452 | 5e-045 |
| AT3G26810.1 AFB2 (AUXIN SIGNALING F-BOX 2); auxin binding / ubiquitin-protein ligase | 395 | 2e-038 |
| AT1G12820.1 AFB3 (AUXIN SIGNALING F-BOX 3); auxin binding / ubiquitin-protein ligase | 391 | 6e-038 |
| AT5G49980.1 AFB5 (Auxin F-Box protein 5); ubiquitin-protein ligase | 309 | 2e-028 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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