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Information for unigene UN27593
| FASTA Sequence |
| Unigene ID: UN27593 | Length: 1319 |
SSR | | CATATCAAAGTGTCGTGATCATTTCAGTCAAAACCAAAGCTTACAATAACACAAAACTAGGCTTCATCTAGCAAAGCTCTATATAC
CAATCAAGCAAAAAAACGAAGCTAGTTCCGTTATAACTCAACACCCAGCTCCCTTTGTTTCAACTCCAATCCCATCCTATCATTCT
CAAGTTTCGTCCTCTCATTCTCCATCCTCATTCTCTCAAGCTCTTGATCTCTTTTCTTACTAAACCTCTCCCACCTGAACCTCTGT
TTCTCCAATTCCAGCAACTCAACTTGAATCTGAAGCTTCTGCTCTTCCAACTCCAGAGTCCTAGACTCAATCCACTGCTTCTGGAC
AGAAGCTGACCTCACACTCTCATCCCCACCTTGAGGAAACGGCATTTGATGAGCCAAAGTGACCTTACTGCATTCCAGAGAATTCA
CATGGCCCTGATGGTCACCATCTTCATGGCTATGGCTCTGTCTCCCCTTCTTCAAAGGACCACCACCACCTCCTCCATAATGAACA
ACCCTACAATCCCCACGGTCAACATCATCATCATGCTCATCATGATCCTCATCATCAAGATCCTCAACCTGATGATTCTCATGATC
ATCTCTGCTTCTAAGCGCCAGCTGTAGCGAACGCTGCAAAGCAAGGTCATGAGGCAAATGCAACCTATTCCCATTATGGTAAGAAC
ACATCTCTTCGTAGAACAACTGCTTAGAACTCATGATTTTCCTAACATCATCCTTCTCCTTATCATTCAAGAACCCAATAGAATCC
AAAAGCTTAGGATTCTCAACAACCTGACAAGAGGTCCCCCTCCCCAAGCATATCGTTAAGCTTCTTATACCGTTTATTCAAATCAT
TAAACTTATCCTCACACTGCTGAGGCGAAACGTGATACCCTCTCTCAGACATGACTTTGGAAACAGACTTCCACTTGCCCTTTTTC
TGCAAAGCAGCGAACTTTCTCCTACTCCCACCATCCATACACGAATCATCACCTATATAAGACACAGCGGTTATCAACAGCTTCAC
CATCTTATCAGTCCACTTCACTCGCTGCCAAGGAGACCCTTTGGCTGACTTGTTGTTGTTGTTGTGACCATCACCACCACTTTCTT
CGTTAAAACTCGGTTCTTCATCATCGTCACTCTCTCTTTCACCTTTATGATGATGATCACAGGTTTGTCCTGTAACCATGGTAAAG
GGAAGACCTTGGAGATGCTGCTGGTTCATGGAATCTGGATGATGAACTCTCATATCGAATCCTCCGAAGGAGGAAGCTCCACCTCC
TTGAGTAAGCTTCCCATCCATTACTCCCT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002890430 hypothetical protein ARALYDRAFT_472358 [Arabidopsis lyrata subsp. lyrata] | 1000 | 4e-106 |
| XP_002532438 transcription factor, putative [Ricinus communis] | 703 | 1e-071 |
| XP_002302181 predicted protein [Populus trichocarpa] | 692 | 2e-070 |
| XP_002306694 predicted protein [Populus trichocarpa] | 667 | 2e-067 |
| XP_002887659 hypothetical protein ARALYDRAFT_895568 [Arabidopsis lyrata subsp. lyrata] | 667 | 2e-067 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P04929 Histidine-rich glycoprotein | 137 | 2e-007 |
| Q8MP30 Uncharacterized histidine-rich protein DDB_G0274557 | 137 | 2e-007 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9T2G9 Transcription factor, putative | 703 | 8e-072 |
| B9GTJ4 Predicted protein (Fragment) | 692 | 1e-070 |
| B9H7R9 Predicted protein | 667 | 1e-067 |
| B9T2G2 Transcription factor, putative | 665 | 2e-067 |
| Q9C6K4 Putative uncharacterized protein At1g76870 | 625 | 9e-063 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G21200.1 transcription factor | 990 | 2e-107 |
| AT1G76870.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 11 growth stages; BEST Arabidopsis thaliana protein match is: transcription factor (TAIR:AT1G21200.1); Has 324 Blast hits to 269 proteins in 64 species: Archae - 0; Bacteria - 2; Metazoa - 125; Fungi - 12; Plants - 63; Viruses - 0; Other Eukaryotes - 122 (source: NCBI BLink). | 643 | 4e-067 |
| AT3G10040.1 transcription factor | 213 | 3e-017 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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