RadishBase

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Information for unigene UN27625

FASTA Sequence

Unigene ID: UN27625	Length: 549	SSR
TTTTTCTCTTATCAAAATAGCCCCTGGGATTTCATTTTCCGTCTTCTTCTTCTTCTTCCCACTGTCAACTATTGTCTTGTCGGTTC TCAATCCCCCGTTCGGCGGCGTATTCTGGTACAAGCTTTGACAGCAGAGGAAGTAATGATGGGTTCGAGAGGAGTTATCAGTGATA AGTGGTCGATGAGGATTCTATGGGGCTGTGCACTCGGAAGTGCTATCGGTTTATACATGGTTGCTGTTGAGAGACAAACCCAGAAC AGGGCACGTGCTTTGGCTGAAGGTATGAGAGCTGCTGAATCACAAGGTGGTGGTGGTTGTGATGGTGATGGTAGTATCTGAATCTA CCCAAGTGCCATCAGTTGAGTTTTTTTTTTGTTTTTTTAGATGTATGGTAACATCTTGCTTGTTCCAAAGATTGTGCTTGTTGCAG TTTCTTGTTGGCAAATATAATCTCAATAAGGTTTTGATACTTGAAGTTGCTAAACATACAAGTTTGTGTTATCAAAAAAGCCTCTT GCTTTCTCTCTTTCATGCTATGTGTGTTCTATC

Annotation (GO term)

GenBank top hits (Blast detail)	Score	e value
NP_974321 uncharacterized protein [Arabidopsis thaliana]	262	3e-021
XP_002862701 hypothetical protein ARALYDRAFT_497332 [Arabidopsis lyrata subsp. lyrata]	262	3e-021
ACU14808 unknown [Glycine max]	222	1e-016
ACU24012 unknown [Glycine max]	217	5e-016
ABW06615 HrpN-interacting protein from Malus [Malus x domestica]	211	2e-015

Swiss-Prot top hits	Score	e value
No hits found

TrEMBL top hits (Blast detail)	Score	e value
Q8L9Y4 AT3G15395 protein	262	2e-021
C6SZY5 Putative uncharacterized protein	222	9e-017
C6TM70 Putative uncharacterized protein	217	3e-016
A8HJR4 HrpN-interacting protein from Malus	211	2e-015
B9SRE1 Putative uncharacterized protein	208	4e-015

Arabidopsis top hits (Blast detail)	Score	e value
AT3G15395.1 unknown protein	262	2e-023
AT3G15395.2 unknown protein	262	2e-023
AT3G15395.3 unknown protein	262	2e-023
AT3G15395.4 unknown protein	262	2e-023

EST library breakdown for ESTs in the assembly

Library

ESTs

Percentage of ESTs in assembly


8	2			40%


9	3			60%

Unigene Members	Member information