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Information for unigene UN27639

FASTA Sequence
Unigene ID: UN27639Length: 1056 SSR 
GGCATTCAAAGGCTGTACTTTTATATATATATGTTGGAATAAATCGATAAAGGAAGGTTACAGTTCTTGCCTGCCAAAGCTCTCAG
TCCCACTATGTATACATGTAAAAAAAAAAAAGATGATGCCAAAAGAGCGTTTGATATTGCAATATCCTACTAATCTACTACAATCG
TTGTCTTTCAAAACCAGGAGGACTACCAAAAACTAAGAACAATCAGAGGGGGAGAAAAAGAGAGCAGAGTATCCCGTTAACTTTTC
AAGTGATTGAATCGTTCTCTATCATCTCTCGCACTTCGTTAACCACAAAATGCGCTTTGTGACCACCGATGACTTCAGCTTGTTTC
TTGTCATCTCTCCATAGCTGCAGAGAGGGAACAAGATACATAAATTAGAAAGAGTTTAAAAGATCCAAAATATGAAGATCATTTCA
AGGCATGGATGATGGGAAACAGATTGGATCACCTGAATCGTTGGCATTTTCCGTGTAGTGTTTCCAAACAAAGATTACATTTAGTT
GTTGTTTATATCAATAACAAAGACTCCCCAAAGTTTTAAATTAGGAAGGTTCATTACCGTTACTCCTGCACGAGACACCAGTTTGT
ATGGCACAGCGTTGACATCAACATGATAAAACCTCAGTCTTGGGTAGAACTCAGCAGCGAGCTTTTCGAGTTTGGGCCTCAAGTAA
ATACATTTCCTGCACCAAGCTGCCATCCAGACGATCACAACAGATTCACCGACCTTCTGAGCTTCCTCCATCACCTCATCGAAGTG
TCTATAGCTACTTATCGGACCTAGCTCGACCGAGACCGGCGAGTCATCATCATCTACCTCTTGTAACTTCTCCTCGGCATCGATTG
CTCGGAGTCTCCCCGTTGCCAGACTGATTTTCCCGGGAAAAGATAGAAACTTTAATCTCCGCGACGAGCTCGAGACTTGACGAGGA
GGAGGAGGAGGAGGAGGAGGTACCAAAGGTGAGACCTTTGGTTTTAAAGATCTCAGAGACGGCGACAAGTTTACAATCTCCGACAT
TCTCTTTCACACTACTAAAGACCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_196046 thioredoxin-like 3-2 [Arabidopsis thaliana]5496e-054
XP_002873141 thioredoxin family protein [Arabidopsis lyrata subsp. lyrata]5461e-053
CAC05508 thioredoxin-like protein [Arabidopsis thaliana]5352e-052
CBI31430 unnamed protein product [Vitis vinifera]3812e-034
XP_002273467 PREDICTED: hypothetical protein [Vitis vinifera]3812e-034

Swiss-Prot top hits (Blast detail)Scoree value
Q8VZT6 Thioredoxin-like 3-2, chloroplastic5547e-056
Q9FG36 Thioredoxin-like 3-1, chloroplastic2535e-021
Q6Z7L3 Thioredoxin-like 3-1, chloroplastic2142e-016

TrEMBL top hits (Blast detail)Scoree value
B8AEW4 Putative uncharacterized protein3263e-028
Q6K9R2 Os02g0819200 protein3263e-028
B9HLI0 Predicted protein (Fragment)3254e-028
B6TCX1 Thioredoxin-like 83201e-027
C0PC09 Putative uncharacterized protein3192e-027

Arabidopsis top hits (Blast detail)Scoree value
AT5G04260.1 WCRKC2 (WCRKC THIOREDOXIN 2)5546e-057
AT5G06690.1 WCRKC1 (WCRKC THIOREDOXIN 1)2535e-022
AT5G06690.2 WCRKC1 (WCRKC THIOREDOXIN 1)2429e-021

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
94  100%

Unigene MembersMember information