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Information for unigene UN27639
FASTA Sequence |
Unigene ID: UN27639 | Length: 1056 |
SSR | | GGCATTCAAAGGCTGTACTTTTATATATATATGTTGGAATAAATCGATAAAGGAAGGTTACAGTTCTTGCCTGCCAAAGCTCTCAG
TCCCACTATGTATACATGTAAAAAAAAAAAAGATGATGCCAAAAGAGCGTTTGATATTGCAATATCCTACTAATCTACTACAATCG
TTGTCTTTCAAAACCAGGAGGACTACCAAAAACTAAGAACAATCAGAGGGGGAGAAAAAGAGAGCAGAGTATCCCGTTAACTTTTC
AAGTGATTGAATCGTTCTCTATCATCTCTCGCACTTCGTTAACCACAAAATGCGCTTTGTGACCACCGATGACTTCAGCTTGTTTC
TTGTCATCTCTCCATAGCTGCAGAGAGGGAACAAGATACATAAATTAGAAAGAGTTTAAAAGATCCAAAATATGAAGATCATTTCA
AGGCATGGATGATGGGAAACAGATTGGATCACCTGAATCGTTGGCATTTTCCGTGTAGTGTTTCCAAACAAAGATTACATTTAGTT
GTTGTTTATATCAATAACAAAGACTCCCCAAAGTTTTAAATTAGGAAGGTTCATTACCGTTACTCCTGCACGAGACACCAGTTTGT
ATGGCACAGCGTTGACATCAACATGATAAAACCTCAGTCTTGGGTAGAACTCAGCAGCGAGCTTTTCGAGTTTGGGCCTCAAGTAA
ATACATTTCCTGCACCAAGCTGCCATCCAGACGATCACAACAGATTCACCGACCTTCTGAGCTTCCTCCATCACCTCATCGAAGTG
TCTATAGCTACTTATCGGACCTAGCTCGACCGAGACCGGCGAGTCATCATCATCTACCTCTTGTAACTTCTCCTCGGCATCGATTG
CTCGGAGTCTCCCCGTTGCCAGACTGATTTTCCCGGGAAAAGATAGAAACTTTAATCTCCGCGACGAGCTCGAGACTTGACGAGGA
GGAGGAGGAGGAGGAGGAGGTACCAAAGGTGAGACCTTTGGTTTTAAAGATCTCAGAGACGGCGACAAGTTTACAATCTCCGACAT
TCTCTTTCACACTACTAAAGACCC
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GenBank top hits (Blast detail) | Score | e value |
NP_196046 thioredoxin-like 3-2 [Arabidopsis thaliana] | 549 | 6e-054 |
XP_002873141 thioredoxin family protein [Arabidopsis lyrata subsp. lyrata] | 546 | 1e-053 |
CAC05508 thioredoxin-like protein [Arabidopsis thaliana] | 535 | 2e-052 |
CBI31430 unnamed protein product [Vitis vinifera] | 381 | 2e-034 |
XP_002273467 PREDICTED: hypothetical protein [Vitis vinifera] | 381 | 2e-034 |
Swiss-Prot top hits (Blast detail) | Score | e value |
Q8VZT6 Thioredoxin-like 3-2, chloroplastic | 554 | 7e-056 |
Q9FG36 Thioredoxin-like 3-1, chloroplastic | 253 | 5e-021 |
Q6Z7L3 Thioredoxin-like 3-1, chloroplastic | 214 | 2e-016 |
TrEMBL top hits (Blast detail) | Score | e value |
B8AEW4 Putative uncharacterized protein | 326 | 3e-028 |
Q6K9R2 Os02g0819200 protein | 326 | 3e-028 |
B9HLI0 Predicted protein (Fragment) | 325 | 4e-028 |
B6TCX1 Thioredoxin-like 8 | 320 | 1e-027 |
C0PC09 Putative uncharacterized protein | 319 | 2e-027 |
EST library breakdown for ESTs in the assembly |
Library |
ESTs | Percentage of ESTs in assembly |
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