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Information for unigene UN27671

FASTA Sequence
Unigene ID: UN27671Length: 1100 SSR 
AAAATGTCAATGGTTACTTATGTTATGATAAGGAACATACACACACACACAAAAAGATGATCGAAAACAACCTTTTGTCACTTTTG
CAAAGACAAAGCAAAAAAATTTGTAAATTTTTATTTTGTTTGTTTAAATCAGTCTTTACGAGTCTGCAATGAATCCTCCAGATCAA
GTTCTAACCCAACACGGTTCCTTATAGTAGCAGCCGCGTGACAAGACGAAGGTGACGTCGTTTTACACATCCTCCCCAATTCCTTA
AACCTCTCCACATCAAAATGTTGACTTTTCAACAGTTTCCTCTGCCTCGAGAGGAACAGTCTCTTCATGAAATCCTGATAAGTCGG
ATCTCTCGAAGTTATCAAAAAGTAAGCGTAACCCACGACGATACTAGTCGCTGTCACGAAGAACGTGATCGGCTCCATGACATCCC
ACGAGAACTCCCAGAAAGTTAGTCTGACGAAGAGACCAATCTGAACTACCGCAGTAGCTAGACCGCCCCACAGAATCCTCCTCACT
TGTCTGTGCGCTAACACATCGATCTCTTCCTTCATGGTCCTCAGCTTGTTGAACTCTTCCTTGATCTGATCTTCCTCTGGAGTTTC
TTCCAAAGGCATCGCTCGTCTGATCAGATCCACCACCTTGTCGGGATGAAGATAGACTTTGTCGAGGAAGATCAAAACGACTCCAG
CCTCGTCGAGGACTCGAGCGAAGACGTGAGCTTCGTCGGGAGATCTAGCGAGACCCATTCCCTGAGAAGCCTCTACAAGTGCATTA
TAAGGAACTACGTCTCTCTCAGACATACCGACAAGCTTCTTCTTCATGTCTTCAACATTCACCAGCCTCATTAGCTTCTTCGCCTC
CGCCATAGTGATCTCCTTTTTCATTTCCTCCTCATTATTATTCTCCGGCGAAGTTTTGACGGTGAAGCTTCTTAACCCATTGACCA
CATTTTTTTTTCACGAACAGAAAGATCTGAGCACTACGTGAAATGAAATCAAAGTAATTAAATTAGCCTCTTAGATCAAGAATTAT
AAAAAGCCAATGAATATGAATTAAAAAAACATGTGTGATTCGATTCGTTAAGTACTGACTTAACGCCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002892511 predicted protein [Arabidopsis lyrata subsp. lyrata]11222e-120
NP_563846 uncharacterized protein [Arabidopsis thaliana]10991e-117
XP_002894678 hypothetical protein ARALYDRAFT_474846 [Arabidopsis lyrata subsp. lyrata]9896e-105
AAG50752 hypothetical protein [Arabidopsis thaliana]9824e-104
NP_176074 uncharacterized protein [Arabidopsis thaliana]9824e-104

Swiss-Prot top hits (Blast detail)Scoree value
Q9NWR8 Coiled-coil domain-containing protein 109B2402e-019
Q8NE86 Coiled-coil domain-containing protein 109A2392e-019
Q08BI9 Coiled-coil domain-containing protein 109A2383e-019
Q3UMR5 Coiled-coil domain-containing protein 109A2365e-019
Q810S1 Coiled-coil domain-containing protein 109B2204e-017

TrEMBL top hits (Blast detail)Scoree value
Q8VYR0 Putative uncharacterized protein At1g576109823e-104
Q9FVU1 Putative uncharacterized protein T8L23.89823e-104
O80539 F14J9.24 protein9383e-099
B9SK68 Putative uncharacterized protein8131e-084
B9IQX7 Predicted protein7842e-081

Arabidopsis top hits (Blast detail)Scoree value
AT1G09575.1 unknown protein11084e-121
AT1G57610.1 unknown protein9821e-106
AT1G57610.2 unknown protein9821e-106
AT1G57610.3 unknown protein6783e-071
AT2G23790.1 unknown protein3933e-038

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
62  67%
 
81  33%

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