Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN27701

FASTA Sequence
Unigene ID: UN27701Length: 1166 SSR 
AGGTCAAACTCGGGTGTGCGTCCTCCATCCATCCATCCATGATTTTATTATCCCTCACGCCGGTGGTGGTGGTGGTGGTGGTGGAG
GCTAGTGCTTCTTCACTGCGGCTACCGCGACCATATTCAGTGTTCTCTTATACCACCACTTGTCGTCGGTTGAGATCCATCCCTTT
CCCTTTCCCTTTCCCTTTCCCTTTCTCTTCTCTCACATGCTCTTGTCTCAATACCAATCCCACTTCCGAGGAGAAAGAAGAAGAAG
AAGAAGAAGAAAAGGTGGTGGGGTTGTCGGTTTTGGGATCAGAGATTCCATGGGAAGACAATAACATATGGAGCACATTCGCTCTT
TACATGTTCTGCCTCCATATTCCTCTCAGTTTTGGTGGTTTATCTCTCCTTTCTCGCCTCCTCCACCTCCCTCTTCTCCATCCTCA
GTCCCAAGTGCTATCCCTTGTACTTCTCCAAATGCTCGAACTTTCACTCACCCTCTTCCTTCTGACGATTACTGCCAAGCCTCAAT
TCAATTCTATCCACTTTCTTAACGCTGCTAACTCTACCCAACAAGGCAGAAACTGGTTGGTTGGATCAGCTTTGGGTTTCGCAACC
CTTGTGTCTTTTATCTTCCTCACTTCACTCGTAGCTGATCAACTCTTCCCTTCTCAGGATGTGCGCAACTCGGATTTGAACAAGAT
CATTGAAAGCGGGGAGGTGTCCAGATTCGGCTGTTTTGCTCTCTACTGCCTTGTTGCTCCCTTTCTTGAGGAGATTGTGTACAGAC
GTTTTCTACTCACCTCCTTAGCTTCCACTATGGAATGGAGCAAGGCCCTTGTTATCAGCTCACTAGTGTTTGCAGCATCTCACTTC
TCTGCGGTGGATTTTGTGCAGCTGTTTGGGATTGGTTGCGTTCTTGGGGGATGTTACAGCTGGTCAGGAAACTTAGCCTCCTCGGT
GGTCGTCCACTCCTTGTACAATGCCCTGACACTCCTCCTTGCGCTACGTTCTTAACCTCAAGATGAGAGAGAGGTGGAGCCATTTC
CCTTGTCTGTGGAATCTCTTTTTATCTTTCTTAAAGAAGACAGCGTATAAACCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTT
AAGAGAGAATCTTGATCCCTTTTCAGTTTAATAAAAAGTGTATTTGAT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002886301 CAAX amino terminal protease family protein [Arabidopsis lyrata subsp. lyrata]9143e-096
NP_565483 CAAX amino terminal protease family protein [Arabidopsis thaliana]9109e-096
XP_002273804 PREDICTED: hypothetical protein [Vitis vinifera]6885e-070
CBI21837 unnamed protein product [Vitis vinifera]6869e-070
XP_002329373 predicted protein [Populus trichocarpa]6671e-067

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q94K61 Predicted protein9106e-096
B9N2C3 Predicted protein (Fragment)6671e-067
B9RW17 Prenyl-dependent CAAX protease, putative6392e-064
C6TBH4 Putative uncharacterized protein6302e-063
C5X576 Putative uncharacterized protein Sb02g011005 (Fragment)5559e-055

Arabidopsis top hits (Blast detail)Scoree value
AT2G20725.1 CAAX amino terminal protease family protein9104e-098
AT5G60750.1 CAAX amino terminal protease family protein1542e-010

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
211  25%
 
193  75%

Unigene MembersMember information