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Information for unigene UN27747

FASTA Sequence
Unigene ID: UN27747Length: 1178 SSR 
CATTTTCTCGCACTTTCTTTCCTTCACTGTGTGATGGCGGCGCAGGTAGAGATCGAGGACCAAGCATCCATCACCGAACTCGATAA
CGGCGAAATTCTCGATCCCCTCTCCTCCTCCTCCTCCGACTCAACGATTCTTCTCGGCGAAGGAAACCAAGAACACCACGTCATCA
CGAAATGTTTCCTCTCCGGCTTCAACGCCACTCTCGCTAACCCAACCACCACGATCGTCGCTATACGTAAGAAATCAACGAACACG
ATCACCACGAGAGCCAAGTCTCTAGCCTTCCGCATCTTCACAGAAGCCATGGCGAGGAAGAACGGCGGAGATCCCAACGTGAAATA
CGCCTGGTACGCTGGCTGCTCTCGAGAACAGCTCGAACGCGTCATCTCCTACGGATTCAGCAGCCGCGAGATCGATGATGATGATG
ATTCGTCTCATGGAATCGGAATCCATCTCGTTCCTTCTAACTTCTCCCTCTTCGCAGCGGAAGGTACGGAGGAAGACGAAGAAGGT
TTAAGGCATCTTCTCTTGTGCCGTTTGATTCTTGGGAAGCCTGAGGAGATCATCCCCGGGTCCAAACAGTCTTACCCTAGCTCTGT
TGAATTCGATTCCGGTGTGGATGACGTTCAGAATCCTAGAAAGTATATCGTATGGAGCTCTACCATGAACTCCTACATCATGCCTA
CTTATATCCTCACTTTCAGGTCTCCTCGTCTCACAGTTGTAAGCAGAGGTGGTTCTCCGGCTACACCAAGCTCTCCGCGGGTTAGT
TTTGCTGCTCTGGTGTCGACGCTGTCCAAGTCGATGGATACTTTGAGAATGAACTTGATCATGAGCACTTACGATGATTTTAGGAA
ACGGAAGATTCAGAGAGATCAATTGGTTAGGAAGGTGAGAGAAGTGGCTGGAGACAACCTTTTGGCTCAGATTATCAAGAACCACG
GAGACAAAAACAGGGTCAGGGTTTAAACAGGCAGGGTAGGAGAAAGGTTCTCACGTGTGACGCGTAATATGATGGGGTAGAAGATC
ACACACGTTATATACAGGCATAGACAGACTCAATTAGTTGTGGAAACTATATCAAGAGTTTTAAAGCTTTTTGTTTTCTTCTTTCT
GTTAGCTTTACAAACAGAGGATCATCCCTTTATGATATGAAAACGTAGAAATTCAATTCA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002890588 predicted protein [Arabidopsis lyrata subsp. lyrata]10722e-114
NP_173769 RCD one 2-like protein [Arabidopsis thaliana]9602e-101
AAF79590 F28C11.18 [Arabidopsis thaliana]9431e-099
XP_002888780 hypothetical protein ARALYDRAFT_476164 [Arabidopsis lyrata subsp. lyrata]8902e-093
NP_177201 SRO3-like protein [Arabidopsis thaliana]8732e-091

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q9ZUD9 At1g235509601e-101
Q9LQC4 F28C11.189431e-099
O64592 F17O7.28372e-087
B9SHA5 Putative uncharacterized protein5773e-057
B9RB22 Putative uncharacterized protein5532e-054

Arabidopsis top hits (Blast detail)Scoree value
AT1G23550.1 SRO2 (SIMILAR TO RCD ONE 2); NAD+ ADP-ribosyltransferase9606e-104
AT1G70440.1 SRO3 (SIMILAR TO RCD ONE 3); NAD+ ADP-ribosyltransferase8791e-094
AT5G62520.1 SRO5 (SIMILAR TO RCD ONE 5); NAD+ ADP-ribosyltransferase4231e-041
AT3G47720.1 SRO4 (SIMILAR TO RCD ONE 4); NAD+ ADP-ribosyltransferase3361e-031
AT5G62520.2 SRO5 (SIMILAR TO RCD ONE 5); NAD+ ADP-ribosyltransferase3191e-029

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
212  67%
 
121  33%

Unigene MembersMember information