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Information for unigene UN27820
| FASTA Sequence |
| Unigene ID: UN27820 | Length: 1033 |
SSR | | GGGACCAAGCACCCTGCATATTCTCTCTACTGTCTTTCTCTCTCTCTCTCTCTCTCTCTCCAAAAAAATGTCAGTCGACAATTACT
CAAGAGACATCTACCACAACACTGTCTCCATGAACCATCACCAAAACGACGCCTTAGCATATAGAGATTCCTTGTTCGAGAAATCA
CTCACACCAAGCGACGTAGGAAAGCTAAACCGTTTAGTCATACCAAAACAATACGCCGAGAAATATCTCCCTCTCAATAATGGCGG
CGGCGACATGACGGCTGAGAAAGGGATGCTTCTTAGCTTCGAGGATGAGTCAGGCAAGTCTTGGAAGTTCAGATACTCATACTGGA
ACAGTAGTCAAAGCTACGTCTTGACCAAAGGATGGAGCAAGTACGTCAAAGACAAGCACCTCGACGCTGGGGATGTTGTTTTCTTC
CAACGGCACCGTTTTGATTTCCATAGACTGTTCATTGGCTGGCGGAGACGGGGCGAGGCTTCTTATCCTTCGGCTATCTCCGCCGT
GTCTCAAGAGGGTCATGTTAACACAACGGCGTACTGGAGCGGCCTGACTACACCTTATCGTCAAGTACACACGTCAAGTAGTTCTT
ACCCTACTATTCACCAAGAATATTCACAATATGGCGCCGTCGCTGAGACACCGACGGTGGTTGCAAGGAGCTCGAGAACGGTGAGG
CTATTCGGAGTTAACCTCGAATGTCACGGTGACGTTGTTGAGCCACCGCCGTGTCCCGATGGCTACAACGGCCAACACATTTACTA
TTAGTCAACTCCTCATCCCCTGAATATCTCATTTGCTGAGGAAACAATGGAGCAGGATGGAGATGGACGAGGTTGATAGTGACAAC
CTTTTAGATCTTGCGTTAGGTTTTGGGCCCCTACTTGACGCAATTGTCATAGAGAAAACATACAAAAGGAGGAGAATTAATATCAG
TGTAAACTTCCTTATGTATTTAGTTATTTACTATCTACTATTCAACTAATTTGAGAACAAGATTTAAAAGAGCCTTTTGAGGCAGA
T
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002884852 hypothetical protein ARALYDRAFT_897360 [Arabidopsis lyrata subsp. lyrata] | 1089 | 1e-116 |
| NP_187765 AP2/B3 domain-containing protein [Arabidopsis thaliana] | 1055 | 1e-112 |
| NP_850559 AP2/B3 domain-containing protein [Arabidopsis thaliana] | 780 | 9e-081 |
| NP_001119177 AP2/B3 domain-containing protein [Arabidopsis thaliana] | 598 | 1e-059 |
| NP_196243 AP2/B3 domain-containing protein [Arabidopsis thaliana] | 593 | 4e-059 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q8RYD3 B3 domain-containing protein At3g11580 | 1055 | 5e-114 |
| Q9FNI3 B3 domain-containing protein At5g06250 | 598 | 5e-061 |
| Q8GYJ2 B3 domain-containing protein At2g36080 | 502 | 7e-050 |
| Q53QI0 B3 domain-containing protein Os11g0156000 | 419 | 3e-040 |
| Q9M268 B3 domain-containing transcription factor NGA2 | 399 | 6e-038 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9SX03 Transcription factor, putative | 463 | 4e-044 |
| A3CF47 Putative uncharacterized protein | 434 | 8e-041 |
| B8BNA0 Putative uncharacterized protein | 432 | 1e-040 |
| C5YS51 Putative uncharacterized protein Sb08g003550 | 432 | 1e-040 |
| B8BJ68 Putative uncharacterized protein | 419 | 5e-039 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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