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Information for unigene UN27840

FASTA Sequence
Unigene ID: UN27840Length: 1008 SSR 
ACTCAGCTTTCTCTCATCTCTTTCGCTTCTTCTCTTTCGTATCACAACCCTAAATAACCCTCAAGACCGATGCAGACAAAGCTCAT
CATAACTCTCAGTTCTTCCTTCAAATCCCAAACCTTTGTCACTTCATCATTGTAAGAGAAAAAGATAAAACAACCGTCAAGTTCTG
CCGAAATGATGAGACCTATCTTCAACCTCGAGATTGAAGCTTCATCGGAACATGATCATTCAGACAGTGCCAGTAGCCAAGTTGCC
TCGAACTTGTCTCCTGTTGGAGACGATTACAAGTCAATCTCTCTGGATCTTAGCCTCTGTTTCAATAACAACAACAACAACTTGGA
TCTTGAATCATCTTCTTTGACGCAGCCAATTTCAAGCACCAGCGAAATTAGCAATCCGGAGCAACAGCAACCATCTGTATCGAAGA
GGGTCTTCTCTTGCAACTATTGTCAACGGAAGTTTTACAGCTCTCAGGCTCTTGGCGGTCACCAAAACGCTCATAAACGCGAGAGA
ACGCTTGCCAAACGCGCTATGCGTATGGGTCTCGCTGGAGTTTTCCCTGGCAGAGGATCTAGTAGCTCCTACGCCGCTGCTGCCAC
AGCAGCCGCTCTCTCGTGCCTCCCGCTGCATGGAAGCGGAAACAGCAACATGACGTCGTTCAGGACTTTGGGAATCAGGGCGCATG
CCTCTCCCCACGACCTAGGCATTACAAGGCCAACACAAGAGACGATCATTAGAAACATTGCCAGGTTTAACCAGGGGTATTTCAGT
AATTTCGTACCTTTTCTCGTTGAGGACGACGAGGCCGAGCTGCTATGGCCCGGGAGTTTCAGGCAACGGGCCAATGAGGTAGCGGT
TGAAGCGGTTGATGGTGATTTAGGTGAACGAAAAGTGGATTACTTGGAGGTCAAACAAGCAGTGACATGGAGTGTCTCTTCAGATC
TACATTGAAGCTTGAGCTATCTCTTTTCCTCGTTTGATTTGGATCTAATTGCTGACGAGATT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_176788 zinc finger protein 4 [Arabidopsis thaliana]10147e-108
XP_002888482 hypothetical protein ARALYDRAFT_475716 [Arabidopsis lyrata subsp. lyrata]9771e-103
AAA87300 zinc finger protein [Arabidopsis thaliana]8784e-092
ACU21215 unknown [Glycine max]3831e-034
XP_002527542 zinc finger protein, putative [Ricinus communis]3613e-032

Swiss-Prot top hits (Blast detail)Scoree value
Q39263 Zinc finger protein 410143e-109
Q42485 Zinc finger protein 12591e-021
Q39261 Zinc finger protein 22033e-015
Q39266 Zinc finger protein 71999e-015
Q39262 Zinc finger protein 31943e-014

TrEMBL top hits (Blast detail)Scoree value
Q0WLF4 Zinc finger protein ZFP410145e-108
C6THB3 Putative uncharacterized protein3837e-035
B9SNH3 Zinc finger protein, putative3612e-032
B9HVS1 Predicted protein3594e-032
C6TK52 Putative uncharacterized protein3577e-032

Arabidopsis top hits (Blast detail)Scoree value
AT1G66140.1 ZFP4 (ZINC FINGER PROTEIN 4); nucleic acid binding / transcription factor/ zinc ion binding10143e-110
AT1G80730.1 ZFP1 (ZINC-FINGER PROTEIN 1); nucleic acid binding / transcription factor/ zinc ion binding2599e-023
AT5G57520.1 ZFP2 (ZINC FINGER PROTEIN 2); nucleic acid binding / transcription factor/ zinc ion binding2033e-016
AT5G10970.1 zinc finger (C2H2 type) family protein2006e-016
AT1G24625.1 ZFP7 (ZINC FINGER PROTEIN 7); nucleic acid binding / transcription factor/ zinc ion binding1998e-016

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
191  33%
 
201  33%
 
91  33%

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