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Information for unigene UN27870
| FASTA Sequence |
| Unigene ID: UN27870 | Length: 1240 |
SSR | | GGATAGTTTTGATCTACTAAAGAGAAAAAAAAAAGTGTACTTTTTCTCTTCAGGGCGTTGCTAAAACTAGTGGGATCAGTGTTTTT
TTTATTGGGAGTAAATGGCAACTTTTCATTCTGTTCAAGATGCAGTGAAGCTCTTTAACGCTGGTTTATCTGGAGGAGAACATCTC
AACCAGAGGCAAGAACAGGAGACTAATCTCTGTCTCTGGAATCAAGAGGTTAACAAGTTGAAGGAGATAATAAAGAATGCTGAGAT
GGCGAAGATCGAGGCTTTGTTAGAGCTTGAGGAAGCTAAGAAAACGGTTGAGCATCTCAATCCCAAGCTGATAAACGATGAGAAAG
GTTTAGATTTGAGTAGTAGTAGTAGTAATGTGAGAGATGTGACTTCAGAGCTAGGTGTTGCTAAAGAATTGCTTCAAAGAGTAGTT
AAAGAGCAGAGTCATCACGACTTAGATAGTAATGTGATAGTTGTGACTTCTGAGCTAGGCTTTGCTAAGGAATCACTTCATAGAGT
AGCTGAAGAGGAGAGTGAATTAAGTAAATTAATGAAGTCTCTTAAGCTCGAGCTTGAAAACGTGAAGAAAGAACATTCTCAGCTTA
TAGAGAAAGAGAAAGAGCAAAGAGAAAGAGACCAAGCCGTCGAGGAGCTGAGGAAGGAAGCTGAAGATGCAAAGAGGGAGCTCTTG
ATGTTAGAGGAAGAGCTCAAGGAAGCAGAAGAAGCCAAAGCAAAAGCTGCAGAGGAGGAATGTGTAAACGTTCACGAAAGTGGTGG
TGGTGGATTAACAGAGACGGAAGTGTTGAGAGTATGCAGAGACGAAACGCTGAAGAAACTAGAGATGAGCGAGAAGGAGATTGAAG
ATATAAAAGCGGCAACGCAGGAGGCGTTGAAGAAAGCAGAGATGGCTGAGGAAGCAACAATTGTGGTGGAGGCAGAGCTTAAAAGA
CGGCGTAAAGCAGCTAGTAGGATCATGGCAGAATCCAAAATGTGTGCTAATAAGTCGTTTCCCTCTGCAAAGGAAGTGCACAAGTC
CAAAACGAGATCCAAAGAGACTTGTTTGGTCAAGTGTTAGGGAAAAGGATCTGTGGTCTCTTTTGAAATTTGTGACATTCTGTATT
AACTCATAATTAGAAGAAATAAGTGTCACTCTTTTGTTCAAAGTTGGTAGCTTTTAATAATGTTTGTGATATTGTGTAAACATTCA
GTATCATCATCGCATAAACTAACCATCTTCACTCTT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_187925 uncharacterized protein [Arabidopsis thaliana] | 887 | 5e-093 |
| XP_002882807 hypothetical protein ARALYDRAFT_478696 [Arabidopsis lyrata subsp. lyrata] | 470 | 1e-044 |
| CAN64061 hypothetical protein VITISV_000013 [Vitis vinifera] | 265 | 6e-021 |
| XP_002266660 PREDICTED: hypothetical protein [Vitis vinifera] | 263 | 1e-020 |
| XP_002298876 predicted protein [Populus trichocarpa] | 255 | 9e-020 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q75JC9 Uncharacterized protein DDB_G0271670 | 168 | 5e-011 |
| P87179 Cell wall integrity and stress response component 1 | 166 | 8e-011 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9LK53 Genomic DNA, chromosome 3, P1 clone:MJG19 | 887 | 3e-093 |
| A5C0E0 Putative uncharacterized protein | 265 | 4e-021 |
| B9GFY6 Predicted protein | 255 | 6e-020 |
| C6JRM9 Putative uncharacterized protein Sb0011s005460 | 233 | 2e-017 |
| B9S9W3 Paramyosin, putative | 224 | 2e-016 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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