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Information for unigene UN27904
| FASTA Sequence |
| Unigene ID: UN27904 | Length: 861 |
SSR | | ATTTATAATTTAATCTATTTTTTTCTTTATAAAATTGTTATGATTCATTTTTTCTTAACTATATATCTTTATTTACACAAGTTTGC
AAAACTTACTATACACATATGAAAGATTAGTTTTATTTATAGATATACACATTTTATATACTAAACAAAATGCAAAGTAGCATTCT
CAAAAAAAAAAAGTATGCATCTAAAATCAATTGAAAAATAAAATAAAATAAAAAGAAACAGTACCGTGCAAAACGTAGAGGAGGCT
GCTTTTAGGCATGTATTCGGAGACGACAAGCTTCTCTTCGCGACGGTAATGATAAGCCAAAGGGGTAAGAACGTTAGGATGTCGTA
GTTTCCCCAAACGTCGTAGCTCGACATCGAACGCATCGCGTGGCAGCTTGTTCATATCCCTAATCCGCTTTACAACCACGGATAAT
CCGTTGGCCATGGCGGCCTTATAGGCCGACCCGAGGCTACCGTTGCCTAGCACCTCGGCCGCAGCCTTCATGAGATCGGGCAAACC
AAAGGATCCTTTCTCGCTGTTCACCATTATAATGTCTCCCATGCCTCCTCCTCCTCCTCCTCCTCCACCACCTTTCGTTGAACCTT
TTTTAGAGGATCCGTCCGCGTTACTACTACTACTCCGCTTCTTACTGCTTCCCTCGGCAGGCTTCTTCACCGAGACCGGCATGCGC
ACTTCCACGCTCTCGTTGTCGCTTAGGTGGTCCTTGCTGAGCATCCTGAACTCTGGCTGCCTCTTCTTATTCCATCTCGTTATAAT
CGCCACCAGGATCAAAAATATCAAGAGAAAAAGAATGACCATGAAGACTGCTTTTCCTGCGCCGTCCACGTCGTTAGGGTCTTTTC
C
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| ABA18095 lrr transmembrane protein kinase [Olimarabidopsis pumila] | 871 | 2e-091 |
| XP_002877261 hypothetical protein ARALYDRAFT_347421 [Arabidopsis lyrata subsp. lyrata] | 848 | 9e-089 |
| NP_189874 leucine-rich repeat protein kinase-like protein [Arabidopsis thaliana] | 835 | 3e-087 |
| NP_197569 leucine-rich repeat protein kinase-like protein [Arabidopsis thaliana] | 668 | 7e-068 |
| XP_002871954 hypothetical protein ARALYDRAFT_488975 [Arabidopsis lyrata subsp. lyrata] | 662 | 3e-067 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9LPT1 Probably inactive leucine-rich repeat receptor-like protein kinase At1g50610 | 296 | 4e-026 |
| Q9FMD7 Probable inactive receptor kinase At5g16590 | 272 | 2e-023 |
| C0LGR9 Probable LRR receptor-like serine/threonine-protein kinase At4g31250 | 271 | 3e-023 |
| C0LGU0 Probable LRR receptor-like serine/threonine-protein kinase RLK | 262 | 4e-022 |
| O48788 Probable inactive receptor kinase At2g26730 | 258 | 1e-021 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q287V6 LRR transmembrane protein kinase | 871 | 1e-091 |
| Q9M1L7 Leucine-rich repeat receptor-like protein kinase | 835 | 2e-087 |
| Q3E991 Leucine-rich repeat receptor-like protein kinase | 668 | 5e-068 |
| B9MT11 Predicted protein | 499 | 2e-048 |
| B9RR77 Serine/threonine-protein kinase PBS1, putative | 465 | 2e-044 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G42880.1 leucine-rich repeat transmembrane protein kinase, putative | 835 | 1e-089 |
| AT5G20690.1 ATP binding / kinase/ protein serine/threonine kinase | 668 | 3e-070 |
| AT1G72460.1 leucine-rich repeat transmembrane protein kinase, putative | 387 | 1e-037 |
| AT1G50610.1 leucine-rich repeat transmembrane protein kinase, putative | 296 | 4e-027 |
| AT3G20190.1 leucine-rich repeat transmembrane protein kinase, putative | 271 | 3e-024 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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