Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN27984

FASTA Sequence
Unigene ID: UN27984Length: 1052 SSR 
GGGGGATCGCGTGCGGAGAGAGAGTGTGAAGAGAGAGAGAGAGAGCTGTGATTCTTCTTCTCTACCCAGGTGTTGTGGTTTGTTGG
AGTTGGTGAGGTGAGGTGGTGGGAGTATGAGTTCAATGAGCAGGAGCAGGAGTCCCAGTCTTGACAGGAGCCGTAGTAGGAGCCCC
AGAGACAGGAGAATGAGATCTGAACGTTCTTCTTATCGTGATGCTCCTTATCGTAGAGGGGACCGTGAGCCACGTCGTGCTTTCAG
CCAAACGAATCTCTGCAACAACTGCAAGCGACCTGGTCACTTTGCAAGAGACTGTCCTAATGTCTCCGTCTGTAACAACTGTGGCC
TTCCAGGGCACATTGCAGCGGAATGCACTGCAGAGTCACGGTGCTGGAACTGCAGAGAACCGGGTCACGTAGCTAGCAACTGTTCA
AACGAAGGAATCTGCCACTCCTGTGGCAAAACTGGACACCGAGCGAGAGACTGCACCAACCCGGTTTCTCGTGCAGGAGACTTGAG
GCTCTGCAACAACTGCTTCAAACCGGGGCACCTCGTGGCCGACTGCACTAACGACAAGGCGTGCAAGAACTGCAGGACTTCAGGTC
ACATAGCTCGTGATTGCCAGAACGATCCTGTCTGCAACATTTGCAGCATCTCGGGACATGTCGCCAGAAATTGCCCGAAAGGGGAC
AGCAGTTACTCTGACAGAGACAGGGACAGAGGAAGCAGGGTTCGAGGCGGTGGGATGCAAAGAGATGGTTTTGGCAGGATGGGCAG
AGACGGCGGTATGCAAAGAGATGGTTTGAGCCGAGTGGGCAGAGACAGCGGCGTTGGCGCTATGATAATATGTCACAACTGTGGTG
GCCGTGGACATATGGCTTATGAGTGCCCATCTGCTCGAATTGCTGACCGTGGTTCCGGCCGTTACTGAAGTTCTTCATTGTTCTTA
GCTTTTAATGTTTGGTGTTTCTATAGCTTTGCGCTCTCGTTTTAGCTTGCTACTTTATTGTTGTTTTCGGCTGTTGGGGTGAGTTA
AGTGTGCTTCTTTTTGTGCG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_565112 CCHC-type zinc knuckle protein [Arabidopsis thaliana]10461e-111
AAM61596 DNA-binding protein [Arabidopsis thaliana]10452e-111
AAF87117 F10A5.22 [Arabidopsis thaliana]9977e-106
ADD09601 zinc knuckle (ccHc-type) family protein [Trifolium repens]9573e-101
ACU24592 unknown [Glycine max]8883e-093

Swiss-Prot top hits (Blast detail)Scoree value
P53849 Zinc finger protein GIS22312e-018
Q04832 DNA-binding protein HEXBP2186e-017
P36627 Cellular nucleic acid-binding protein homolog1773e-012
Q05313 Gag polyprotein1415e-008
P31821 Gag polyprotein1381e-007

TrEMBL top hits (Blast detail)Scoree value
Q8GXC5 DNA-binding protein10469e-112
Q8LF59 DNA-binding protein10451e-111
Q9LQZ9 F10A5.229974e-106
D3YBF0 Zinc knuckle (CcHc-type) family protein9572e-101
C6TNV0 Putative uncharacterized protein8882e-093

Arabidopsis top hits (Blast detail)Scoree value
AT1G75560.1 zinc knuckle (CCHC-type) family protein10465e-114
AT1G75560.2 zinc knuckle (CCHC-type) family protein10465e-114

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
112  67%
 
61  33%

Unigene MembersMember information