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Information for unigene UN27994
| FASTA Sequence |
| Unigene ID: UN27994 | Length: 891 |
SSR | | TATTTATTCTCTGTCTAGTCTCTCTCTCTCTCTCTCTGGCGAAACCCAGATCGAAAAAGTCGGTCAGTTCCTCTTAAAAAAGTCTG
TTTCTTTGGAGGGATTCAAGATCCTCCATGGACGGAGTAGCTAACGTAGCAGTCTCCGGGACGACGACGACGACGAGGAAGAGAGA
GAGACCTTACAAGGGTATAAGGATGAGGAAGTGGGGCAAATGGGTCGCGGAGATTCGCGAGCCTAACAAGCGCTCTAGGCTATGGC
TCGGCTCTTACTCCACCCCCGAGGCCGCTGCTCGGGCCTACGACACCGCCGTTTTCTACCTCAGAGGACCCACGGCGAGGCTCAAC
TTCCCCGAGCTTCTCACCGGAGAGAAATTCACCGAGGAGGACATGTCGGCCGCCACGATTCGGAAGAAAGCGACGGAGGTGGGCGC
TCAGGTCGACGCTTTGGGCTCGGCGGTGCTCGATAACCTCCACCGTGTTTTTGGTCGGGATCGAGAGAGTTCTGATGATGATAACA
AGAACTTTCATCGGAATTATCAAAACGAAGATGAAGATGAGAAGAGGTTGAAGAGTGGCGGGTGGTTATTGGAACGGGTTGACTTG
AATAAACTACCCGACCCGGAGAGCTCCGATGAAGACTGGGAGACCAAATGATAATAATATTATTTAATATAATTGGAGCGGCCACG
GTGGCCGGCTCCTAACGCACGCCTCCGCCTACCTCTGCGAAAATCATTAGCGCCGTTTATGTTTTTTTTTTTGCATTAATTATCTG
AAATTTTAGGGTTTTTAGTTGTTTTTTTTCTTCTTTTTTTGCTTCTTTCTTGTCTTTTATTACGTGTTTTGGTGGTTTATCGAATT
TTAGGCTATTGCTTAAAGAATGCAAAATGTA
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| BAJ34079 unnamed protein product [Thellungiella halophila] | 779 | 9e-081 |
| NP_201520 ethylene-responsive transcription factor ERF010 [Arabidopsis thaliana] | 765 | 4e-079 |
| ABK28777 unknown [Arabidopsis thaliana] | 765 | 4e-079 |
| AAT44927 putative AP2/EREBP transcription factor [Arabidopsis thaliana] | 759 | 2e-078 |
| XP_002865019 hypothetical protein ARALYDRAFT_919990 [Arabidopsis lyrata subsp. lyrata] | 639 | 2e-064 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9FH94 Ethylene-responsive transcription factor ERF010 | 765 | 2e-080 |
| O22174 Ethylene-responsive transcription factor ERF008 | 469 | 4e-046 |
| Q9SNE1 Ethylene-responsive transcription factor ERF011 | 461 | 3e-045 |
| Q9SW63 Ethylene-responsive transcription factor RAP2-10 | 364 | 6e-034 |
| Q8LC30 Ethylene-responsive transcription factor RAP2-1 | 354 | 8e-033 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| A9PL95 AP2/ERF domain-containing transcription factor | 476 | 9e-046 |
| A9PAI2 AP2/ERF domain-containing transcription factor | 464 | 2e-044 |
| B9R789 Dehydration-responsive element-binding protein 1B, putative | 417 | 6e-039 |
| A9NJI8 Dehydration responsive element-binding protein 1 | 397 | 1e-036 |
| A9NJJ6 Dehydration responsive element-binding protein 1 | 397 | 1e-036 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G67190.1 AP2 domain-containing transcription factor, putative | 765 | 2e-081 |
| AT2G23340.1 AP2 domain-containing transcription factor, putative | 475 | 7e-048 |
| AT3G50260.1 CEJ1 (COOPERATIVELY REGULATED BY ETHYLENE AND JASMONATE 1); DNA binding / transcription factor | 461 | 3e-046 |
| AT4G36900.1 RAP2.10 (related to AP2 10); DNA binding / transcription factor | 364 | 5e-035 |
| AT1G46768.1 RAP2.1 (related to AP2 1); DNA binding / transcription factor | 354 | 7e-034 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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