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Information for unigene UN28042

FASTA Sequence
Unigene ID: UN28042Length: 1166 SSR 
GGGCTGGTCTTGACCCACACTTTCAACGAGAGAAGTTCAACTATTACAACAACAAATGTGTTTCAATAAGAACGATATGATGGCAA
ACGAAGTGGGAACCGAGAGACAAGCGTTTGGTTCATCTGAAGAAGAAGATGATGAATCTCGAGCTGGAAATGCCAACAATTTGTTA
CAGATCACTCAACAACAACAACAACCGCTAGCTCCTGTTGTTGTTGATTGGGAGAGATTTCTCCCAGTTAGATCGCTTAAGGTTCT
TCTGGTGGAGAATGATGACTCAACTCGCCATATTGTTACTGCTCTCTTGAAGAACTGCAGCTATGAAGTTACTGCTGTTCCGGATG
TCCTTGAAGCCTGGACAGTCCTAGAAGACGAGAACAGTTGCATCGACCTTGTCTTAACGGAGGTTGTTATGCCTGTGAACTCTGGA
ACCGGTCTGTTGTCCAAGATTATGAGCCATAAGACACTTAAGAACATCCCTGTCATAATGATGTCATCTCATGATTCCATGGTTCT
GGTGTTCAAGTGTTTGTCGAATGGTGCTGTTGATTTCCTCGTGAAACCTATTAGAAAGAACGAGCTGAAGAATCTTTGGCAGCATG
TCTGGAGAAGATGCCACAGCTCTAGCGGCAGTGGGAGTGAGAGTGGGATACATGACAAGAAGTCAGTGAAAACTGAAAGCACTGAA
GGGTCAGAAGACGATGATGCCATCATGAGTGATGAAGAAGATCAAGGGAATGATAATGGATTGAGTAACGGAGATGGTGGGAGCGA
TAACGGGAGTGGAACTCAGAGCTCTTGGACCAAAAGAGCCAGTGATGTTAACAAACTGAAAGAGGTTGAAGATGAGCATGGACAAA
TAGGCAGGGGATCCAGGCAAGACAGTGTATGATGAGTAAGGAAGCTGAAGAAGAAGCAGGAAATCTAGAGAGGGATGCAAAGTATT
CTTCTGTTCAAGCTTTGGAGAGAAACAGTGATGACATGCTGAATCGCTCACAAGTAGGAAACAAAACACCATCTAATCCTCCAGAA
GATTTGCAATCACTCGAGCTAACTCTGACAAAACCAAGAGAGACTGGAGATCAGATAGTCAATGTTCTGAAGCAGTCAAATCACTC
TGCATTCTCAAAATACGATAACGGTGCTACTTCTGCTAAAAAGTATCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
ADA58340 pseudo-response regulator 3 [Brassica rapa]11268e-121
XP_002866368 pseudo-response regulator 3 [Arabidopsis lyrata subsp. lyrata]10443e-111
AAY62604 pseudo response regulator 3 [Arabidopsis thaliana]10372e-110
AAY62605 pseudo response regulator 3 [Arabidopsis thaliana]10362e-110
NP_568919 two-component response regulator-like APRR3 [Arabidopsis thaliana]10335e-110

Swiss-Prot top hits (Blast detail)Scoree value
Q9LVG4 Two-component response regulator-like APRR310386e-112
Q93WK5 Two-component response regulator-like APRR76855e-071
A2XFB7 Two-component response regulator-like PRR736765e-070
Q10N34 Two-component response regulator-like PRR736765e-070
Q0D3B6 Two-component response regulator-like PRR376481e-066

TrEMBL top hits (Blast detail)Scoree value
D2KK86 Pseudo-response regulator 311266e-121
B9T0R7 Sensory transduction histidine kinase, putative7816e-081
B9SGT0 Sensory transduction histidine kinase, putative7431e-076
Q2PEF7 Pseudo-response regulator 37 homologue7422e-076
B9HM08 Pseudo response regulator7377e-076

Arabidopsis top hits (Blast detail)Scoree value
AT5G60100.1 APRR3 (ARABIDOPSIS PSEUDO-RESPONSE REGULATOR 3); transcription regulator/ two-component response regulator10385e-113
AT5G02810.1 PRR7 (PSEUDO-RESPONSE REGULATOR 7); transcription regulator/ two-component response regulator6854e-072
AT5G24470.1 APRR5 (ARABIDOPSIS PSEUDO-RESPONSE REGULATOR 5); transcription regulator/ two-component response regulator4427e-044
AT2G46790.1 APRR9 (ARABIDOPSIS PSEUDO-RESPONSE REGULATOR 9); protein binding / transcription regulator/ two-component response regulator4354e-043
AT5G61380.1 TOC1 (TIMING OF CAB EXPRESSION 1); transcription regulator/ two-component response regulator3002e-027

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
111  33%
 
62  67%

Unigene MembersMember information