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Information for unigene UN28053
| FASTA Sequence |
| Unigene ID: UN28053 | Length: 1377 |
SSR | | TTTTTGTAAGAGAGAAGAAGAGAGAGAGAAGGCTATGGAAAGATAGATAAAACTCAGTTTATTTTGAAAATACACAGAGGAGAGAG
ATAGAGAGAGAAGGAGATGGGGGATTCAAGCGGTTCTGTCTCCATTGATATGGAGGCAATGTCTCTTGGAGGACAGGAACACCTTG
TGGAGACTACCTATGGCCCGGTATGTGTTGCCGTTTGTGGAGATCCTGATAAACCTGCTCTTATCACATATCCTGATGTTGCTCTT
AATTATATGTTTTCTTTTCAAGGGTTGTTGTTTTGTCCAGAAGCTAGTTCCTTGTTACTCCACAACTTTTGCATTTATCACATCAG
TCCTATTGGCCATGAGTTAGGAGCTCCAGTGATCGGTGTTGATGCTCCTTTGCTCTCAGCTGATGACTTAGCTGACCAGATAGTCG
AGGTTCTTAACTATTTCGGACTTGGTGCAGTAATGTGTATGGGAGTCACAGCAGGAGCTTACATTCTGACCTTATTTGCTATGAAG
TACAGAGAGTTCTGGGATTAATACTCGTCTCTCCACTGTGCCAAGCTCCTTCTTGGTCAGAATGGTTGTGCAATAAGGTTATGTCT
AATCTTCTTTATTACTATGGCATGTGCGGAGTGGTTAAAGAATTGCTACTAAAACGGTACTTCAGCAAGGAAGTTCGTGGTAATGC
TCAAGTTCCAGAATCAGATATTGTTCAAGAATGCAGAAGATTACTTTGCGAGCGGCAGAGTACAAATGTATGGAGATACCTTGAGG
CAATCAACGGGAGAGTGGACCTTAGCGAAGAGTTAAGGAAACTGCAATGCAGAACTTTAATATTCATCGGCGAAAATTCAGCTTAC
CACTCAGAGGCCGTTCACATGACCACAAAACTAGACAGACGATACGGCGCACTAGTCGAGGTACAAGGAAGCGGGTCGTTGGTGAC
AGAATAGCAGCCACAGGCGATGGTAATACCGATGGAATACTTTTTGATGGGGTACGGATTGTATCGTCCAGCACAGAGCGTGAGCC
CGAGAAGTCCTTTGAGCCCAACGAGGATCTCGCCTGAGCTTCTCTCCCCTGAAAACATGGGGTTGAAGCTCAAGCCCATTAAGACA
AGACTCGCGCTATGACACACAACTCTGCCTCCTCCTCTTTGTGCTATAGAAATTATTGCAACATATATATATATTTATATACGTTA
CATAAAAAAAATCGACATTGGTTTGTGGAGTTTGAGATGCTCTTTTGTGTTATGATTAAAGCTGTAGATATAGACAGGGACACAGA
TGTTTTATGTTTTTTGGAAATTTTGTGGTAGCTGTTATTGTTATGTTTGTACATTTTGTTGAATAAATCATTTAAGGAAAATTTCC
C
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| GenBank top hits (Blast detail) | Score | e value |
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| XP_002871500 ndr family protein [Arabidopsis lyrata subsp. lyrata] | 1009 | 4e-107 |
| NP_568251 protein N-MYC downregulated-like 2 [Arabidopsis thaliana] | 1001 | 3e-106 |
| BAH57237 AT5G11790 [Arabidopsis thaliana] | 1001 | 3e-106 |
| CAB87697 putative protein [Arabidopsis thaliana] | 971 | 1e-102 |
| XP_002516460 pollen specific protein sf21, putative [Ricinus communis] | 865 | 2e-090 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| O23969 Pollen-specific protein SF21 | 655 | 2e-067 |
| Q9UN36 Protein NDRG2 | 212 | 4e-016 |
| Q5RBN6 Protein NDRG2 | 212 | 4e-016 |
| Q9QYG0 Protein NDRG2 | 206 | 2e-015 |
| Q8VBU2 Protein NDRG2 | 206 | 2e-015 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| C0Z3F8 AT5G11790 protein | 1001 | 2e-106 |
| Q9ASU8 AT5g11790/T22P22_180 | 1001 | 2e-106 |
| Q9LYF2 Putative uncharacterized protein T22P22_180 | 971 | 7e-103 |
| B9RRU1 Pollen specific protein sf21, putative | 865 | 1e-090 |
| B9HDP2 Predicted protein | 823 | 1e-085 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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