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Information for unigene UN28172

FASTA Sequence
Unigene ID: UN28172Length: 1340 SSR 
CACACCACATCTCTCTCTCTCTTTATCTCGATATGTCTCGTCTCCCTCCAGTCTGCCTCCCCCTCATGGAGGACAAAACCCCTCCT
TCCGAGTTAACCCCGACTCGACTCGGTTTCCCCACCGAGTTCCCTTACGAGTTCGACTCTCCAGCTTTCACCTCTCCCGGCGACTC
CACCGACGAGAGCAGCGACGACGAAGAAGACTTCCTCGCCGGGTTGACTCGCCGACTCGCTCCCTCGACTCACCGCCTCCCTCCTC
CCTCCGAAGTGAAGCGTCAGGTCGCAGCTACCTCGCCGCAGTCGACGCTGAGCGGACTCGGAAGCTACTCCAACTCGGGAAGTAGA
AGCCCTGTTCTCCCACCTTCTCAGGCTCATACGGCGTCGTTCCGTAGAGACAGTGTCTTGGACGTGATCTCTGCCGCGGCAGGAGA
AGTAGCGAGACTCAAACTCGGAAGCTACGACGAGCCTCACCACCACTTGCCCCGCCAAAACGCTGCGTTTCAGAGCGACCGCTATA
TCCAGCAGCAGCGTATCCTCCTTCACCAGATGTGGCTCTCTTCTCAAGCAAGAATCAAGTCCTCGGTGACCGAAGAGCTCGCATTT
GAAAACCTTAGACAGATGAAGCATAGTGCTTTAACCAACGCCGCGTTGATGCGTCGTCAGCACGCCGGAGGAGCTCCTCCGAAACG
TCCTTCTGCCGGCACCGGAGTTTTCCTTCCCCGGCGATACCCAACAACCGCCCCTTCAGAGCCCATCAAGAAACCAGTTCCAGTCA
ACACAACGGCTATGTTGCGGTCAAAAGTAAACTTTGATGAGTTCATCGATATTAAGACAAGACACAGTCAGTTCGATTACGAGTGC
ATGCTAGCAAGAAGTTGACTACTTGCTCGTCAGGGAAACTCCAGAGCAGTTCGTTGTCTGAATCAAGAGAGACGTCTTCCTCAGGA
CTGGATGTACTGAAACTGTTTGTTTTGTTTAAGGAGGAGCCTTGTTAGAAGTTGTTTGGTGGTTTTAGGTTATAAACTGTGATTGT
TATGGTATGGTTATTACTAGTGATAAGGATTTCGAAATCCAAATAAAAGTTAGGGGATATTTACAAGTGTGTTACATTAGTATAAT
ACTATTGTTAGTCACTTGGACAAAAGCTCTCTGTAATTTTCTTTTTTGCTGACCTTGGGAGGGTTCAAGGGAGTTTTGAGTGGAGT
GTTGTACTATTATTTTTCACTTTAGTCGACATGTTAAGTTTCAAAATGTGTTGGGTGGGGTATTTTTGTTATTTGTTGTATTAATT
TCATATTTTTCTAATGGGGTTGTAATAAAAACACTTGAATTAAAAAAAAA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002879829 hypothetical protein ARALYDRAFT_483023 [Arabidopsis lyrata subsp. lyrata]9332e-098
NP_565916 uncharacterized protein [Arabidopsis thaliana]8661e-090
XP_002876325 hypothetical protein ARALYDRAFT_907002 [Arabidopsis lyrata subsp. lyrata]3151e-026
NP_191128 uncharacterized protein [Arabidopsis thaliana]2622e-020
XP_002316248 predicted protein [Populus trichocarpa]2048e-014

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
O04191 At2g39870/T5I7.178661e-090
Q9M053 At3g556902871e-023
B9HT34 Predicted protein2046e-014
B9HHJ2 Predicted protein1965e-013
A5AD59 Putative uncharacterized protein1392e-006

Arabidopsis top hits (Blast detail)Scoree value
AT2G39870.1 unknown protein8674e-093
AT3G55690.1 unknown protein2877e-026

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
211  25%
 
111  25%
 
82  50%

Unigene MembersMember information