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Information for unigene UN28176

FASTA Sequence
Unigene ID: UN28176Length: 637 SSR 
GGATCAACCTCACAACATAAAACCATTTCTCAAAATCATCACTCTCTCTCTCTCTAATGGCGTCTCCTAAATCCTCAACAAGACCC
ACCCAGCAAAACCAAGAACCCACTTTCCACGACTTCTTCCCGGCGATGGCCGGGAAACTCGGAGGAGAAGGTCTCATCGACGAGCT
CTGCAAAGGGTTCGAGCTACTCGTCGACAGAGAGAGAGGTGTCATCACTTTCGAGAGCTTGCGGCGAAACGCATCGGCGGTCCTTG
GGCTCGGTGACCTGACGGACGACGATGTAAAGTGTATGATCAACGAAGGGGATTTCGATCGAGACGGTGCGTTGAATCAGATGGAG
TTTTGCGTGCTCATGTTTAGGCTTAGCCCTGAGTTGATGGAGGCGCCACGGTGCGTTGTCACTGAAGCGATGGAGGAGGAGTTTGG
TGATCGAAGGCACAGGCGTTGATGATAGAAAGCTTCTTTCTCTATGAGAGACTTTGACTTATTTGTTTTTAGTTTTTTACTATTTT
AAATTTTTTTAACCGATTCTTCTTTTATGTTCTTTCCTATGTTCTCTTTGATTTCCTTTTGCAGTTCGTATAAATTGTTGGATATA
TTATAATAAAACTGATATGGAAAATCTTTGACAAT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002864336 pinoid-binding protein 1 [Arabidopsis lyrata subsp. lyrata]5913e-059
NP_200260 pinoid-binding protein 1 [Arabidopsis thaliana]5691e-056
AAM61056 EF-hand Ca2+-binding protein CCD1 [Arabidopsis thaliana]5635e-056
NP_194458 EF-hand, calcium binding motif-containing protein [Arabidopsis thaliana]5601e-055
XP_002867515 calcium-binding EF hand family protein [Arabidopsis lyrata subsp. lyrata]5592e-055

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q9LSQ6 At5g544905697e-057
Q8LG35 EF-hand Ca2+-binding protein CCD15634e-056
O81831 AT4g27280/M4I22_905608e-056
B9SSA8 Ccd1, putative3969e-037
B9I051 Predicted protein3842e-035

Arabidopsis top hits (Blast detail)Scoree value
AT5G54490.1 PBP1 (PINOID-BINDING PROTEIN 1); calcium ion binding / protein binding5695e-059
AT4G27280.1 calcium-binding EF hand family protein5606e-058
AT2G46600.1 calcium-binding protein, putative2748e-025
AT3G50360.1 ATCEN2 (CENTRIN2); calcium ion binding1125e-006

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
63  100%

Unigene MembersMember information