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Information for unigene UN28186

FASTA Sequence
Unigene ID: UN28186Length: 935 SSR 
GCTAAGGGAAATGCAGTATTACAAGCTAGCTTGGAGAGAAGGAAGCAAGCTTTGCACGAGCGTCGGTTGGCACTCGAACAAGATGT
TGGGAGATTACAAGAGCAGCTGCAAGCTGAGAGAGACCTCAGATCCGCTCTTGAAGTTGGTCTTAGCATTTCTTGTGGACACTTTA
GCTCACAAGCTGCGGACTCTAAAACAAGGGCTGAGCTTGAGGAGATTGCTCTCGCAGAAGCTGATGTGGCAAGACTGAAGCAGAAA
GTTGCAGAGTTACATCATCAGCTTAGTCAACAGCGTCATCATCACTTAAGCTCACTCCCAGATGCTCAAAGCCATCATCAGTTTCT
CCAGAATCACAATACTCAACTGAAGTCTTTTCAGCAGGACTTCGATTCCATTCTTGCTTTCGTCAATCAAGAAAGAAACCAGAGAA
CGGATGAGAGCAGCTTAAGAGCAGAATGGAGAAACGGTAGAGGAAACAACAACAGACAAGTACCAGGCTCGCCGAGGCTAAACGAA
GCATCCTTAGGCATTCCAATGGAAGAGTTTTCACCTGTGATGGAGTACGCAAGACATGAGCATAATAACCATCCTCCTGCTCCTCC
TCCTGGAGCATCTGCAGCTCTGATGGAGCTAACAACACGTCTGGATTTCTTCAAGGAAAGACGTTCACAGCTTATGCAACAGATTT
CAAACCTCGACCTCAACTATGGTTCTTCCTCTTCTGTGCATAGATCGTCTTCTCCACCGTGGAACTAAGCTCTTTTAAGCTGTTTT
CTCCCCCTCTCTCTCTCTCTTTTATCCAAGTAATCAGAAAAAAATGTATATCTGTGGACTCATGCAGGACATGCTTGTAAAACACC
GGTTTAAAGCCAAACCGAGTATATCTATGGACCAAAATGTGATGAGAAGTTGGTTTTCTCGTACGTTCGTTTTTT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002873552 hypothetical protein ARALYDRAFT_488058 [Arabidopsis lyrata subsp. lyrata]10746e-115
NP_196776 Rho GTPase activation protein (RhoGAP) with PH domain [Arabidopsis thaliana]10702e-114
BAF01816 hypothetical protein [Arabidopsis thaliana]10702e-114
NP_001119213 Rho GTPase activation protein (RhoGAP) with PH domain [Arabidopsis thaliana]8676e-091
NP_197440 Rho GTPase activation protein [Arabidopsis thaliana]6014e-060

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q0WM40 Putative uncharacterized protein At5g12150 (Fragment)10701e-114
Q9FMP8 Putative uncharacterized protein At5g12150; MXC9.1110701e-114
B3H5D4 Uncharacterized protein At5g12150.28674e-091
Q27GI9 Putative uncharacterized protein At5g19390.36013e-060
Q8RWQ4 AT5G19390 protein6013e-060

Arabidopsis top hits (Blast detail)Scoree value
AT5G12150.1 pleckstrin homology (PH) domain-containing protein / RhoGAP domain-containing protein11146e-122
AT5G12150.2 pleckstrin homology (PH) domain-containing protein / RhoGAP domain-containing protein8673e-093
AT5G19390.1 pleckstrin homology (PH) domain-containing protein / RhoGAP domain-containing protein6012e-062
AT5G19390.2 pleckstrin homology (PH) domain-containing protein / RhoGAP domain-containing protein6012e-062
AT5G19390.3 pleckstrin homology (PH) domain-containing protein / RhoGAP domain-containing protein6012e-062

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
122  50%
 
61  25%
 
81  25%

Unigene MembersMember information