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Information for unigene UN28200
| FASTA Sequence |
| Unigene ID: UN28200 | Length: 1233 |
SSR | | GGAACGGTGACTTGTTCTCTAATCGCTAGACCTATTTCTAGGCTCCTCCTTTGTAGCTGAGTTTGCAGTTAACAAATTTAACCAGA
AATGTCTCAAATGAATCTACCGTTCGAAGTTGGTCACACCATCGAAGCAAGATCTTTCGAATTGGGTTTCCGTGGAGCATGGTTTC
GATGCAAGATTACAAAGATATTCAACAAAGGGCGAGCTTTATTCTACGATTTGGAGTACCTTGATTTCACAGAAGAAGGAATACAC
ACAACAAAAGTATTCCAAAAACGCCAAGGCGAGAACGAGAGTACCCTAATGGTTCGACCCATACGTCCACCTCATGAAAGTGAAGT
CCTTGACGAGGAAGAAGAAGAAGTTGTTGTTGTTGTTAACGGTGTTTGGAAGCTGGGAGACTTGGTGGATTGGTGGAAAGACGATT
GCTATTGGTCTGGGACGGTTCTAGAAGTCAGAGAAGAAGATGAATCGGCTAAGATTGAGTTGTTGCCTGAACCGTATGGAGAAGGA
AAAAACTATGATGCTGTGTTTAAGGATTTGCGTCCTTCCTTGGAATGGTCACTCGAAGATGGATGGATTGTCCCTTTCTCTAAGGA
TGGGGAAAAGAGGCAGTGTGCTAAGCTAATGAAACTTCCAAATGAAGGAGCTGAAGAAAAAATTAGAGAAGAAGAAAAGCTGAGAC
CTACAAAGAAGCTAGTAGGAGATGAGGATCTAGCGTTGAATATCATGGAATCAGAGTTTATAGAAGCCGCTGTGATGGACTTAGAA
GAGATAGTTGTTCGAATAGAGTGGATTAAGGGAATGTTGTCGCTAAATTCAGAAAATTCAACCTGGACATATGAGGACTATCATCC
ATCCTCCTAAAAAAACAATGTGACAGGTAAGATATATTTTTAACTTTTGCCAATGATCACCATTTTTGATGGATTTTAAAGAAAGG
CAGTCCTTAGGGTGGAGAGGATTAGAGTAAAAGATGTAAATGAGGGTAAGACCAAGGTGGATCATACCTGACACGTTTTGTGAAAT
TGAAAACAGAACATGACACTGTTTTTTAGTTGTCTTTAGTTTAGGTATTTTGGTTTCCCCTGTTTTTTTTCTGTTTGTTGATATAC
TTTGCAGCTATTTCCTTGTATTTTACCTCGAACCTACTTTTGGCTTTTAAATTCTTGTTAGTTTCACGCTCAGATCTCCAAGGCTT
CCCTTATTCAGATACAATATTGAGACTTT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_199081 Agenet domain-containing protein [Arabidopsis thaliana] | 855 | 2e-089 |
| NP_200020 Agenet domain-containing protein [Arabidopsis thaliana] | 640 | 2e-064 |
| XP_002864152 agenet domain-containing protein [Arabidopsis lyrata subsp. lyrata] | 634 | 1e-063 |
| XP_002865497 predicted protein [Arabidopsis lyrata subsp. lyrata] | 614 | 2e-061 |
| BAB11055 unnamed protein product [Arabidopsis thaliana] | 480 | 7e-046 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q75JC9 Uncharacterized protein DDB_G0271670 | 132 | 7e-007 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9FMZ7 Genomic DNA, chromosome 5, P1 clone:MJB21 | 855 | 2e-089 |
| Q8RXR3 Putative uncharacterized protein At5g52070 | 640 | 1e-064 |
| Q9FJ85 Genomic DNA, chromosome 5, P1 clone:MSG15 | 480 | 5e-046 |
| B9HKF5 Predicted protein (Fragment) | 428 | 5e-040 |
| B8A1W3 Putative uncharacterized protein | 354 | 2e-031 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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