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Information for unigene UN28205

FASTA Sequence
Unigene ID: UN28205Length: 854 SSR 
ATCATAAATAATTAACTACGTATCAATACATGTCACACATTCATCTGATGCTTGAGAATGTTGTATGAAGAAGAAATTTATTTTTG
CTCAACATAAGATTTAACAGTCTCCATCCATCGAATATACTCGGCTTTATCTTTGTTCTTCATGTACTGATGCAAGAACACAGCAA
GATCATCGCTTATACCTCTTTCCTCCAAAAATTGATACACCGAGTCTTGAAGTTCATCTTCCATTTCCTCGAATTCCGGTCCAACA
TAGGCATTAGGTGAGTTCTTGCTGCTTTTACGAACAAAGAACTTGGAGATCTGTATAGTATCGGGCCAAGCAGAACACATGACCTC
TAAGGTCTGACCATCACCGTCCTTAGAGATGTTGACAACGAAGGTAATGTGAAGCTGAACATCTTCAGGGTCACTGCTGCAGACTT
TGAAGATGGAACTGATCCATCAAACATGGTTGCTTCGATCTTGATATCTTCCTTGTCCCCATATTTTCTTCTCAAACTAACCCACT
GCTCTCCTGGCCGCTCATCCACCGTGAATGGGCCAAACTTTTCCTCAGGCTGGAGAGGAGGAGAGTGATCGAGCTCGGACTGAATC
TCCGAACGAATTAATCGGAGAATGTTACCCTCGAACGCTGACTTCCGCATTTCCGACGCGTAACTTCCCGAGCTTAGAAACTTGGG
AACAATTAACAAACTAGGGTTTTGAATTGGCTGAACACATACCCTATGGTTTCGGCAAGAAAACGAAGGTGATAAGTTAGTAGATA
TCACTGTTCTTCTCAGACATCTGACGAGGCGAGACATTGACAGAGATGGAAGAAGAAGAAGAAGACAGTAGCAGAAGCCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_563984 Mitochondrial glycoprotein family protein [Arabidopsis thaliana]5522e-054
XP_002890132 mitochondrial glycoprotein family protein [Arabidopsis lyrata subsp. lyrata]5442e-053
XP_002889277 hypothetical protein ARALYDRAFT_340150 [Arabidopsis lyrata subsp. lyrata]4617e-044
AAM67360 unknown [Arabidopsis thaliana]4421e-041
NP_565244 Mitochondrial glycoprotein family protein [Arabidopsis thaliana]4357e-041

Swiss-Prot top hits (Blast detail)Scoree value
O94675 Mitochondrial acidic protein mam331371e-007

TrEMBL top hits (Blast detail)Scoree value
Q9LMP8 At1g15870/F7H2_195521e-054
Q8LD40 Putative uncharacterized protein (Fragment)4427e-042
Q9SAI6 At1g807204355e-041
B9GMC5 Predicted protein3925e-036
B9SMU6 Putative uncharacterized protein3908e-036

Arabidopsis top hits (Blast detail)Scoree value
AT1G15870.1 mitochondrial glycoprotein family protein / MAM33 family protein5536e-057
AT1G80720.1 mitochondrial glycoprotein family protein / MAM33 family protein4362e-043
AT4G31930.1 mitochondrial glycoprotein family protein / MAM33 family protein2014e-016
AT4G32605.1 LOCATED IN: mitochondrion; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial glycoprotein (InterPro:IPR003428); BEST Arabidopsis thaliana protein match is: mitochondrial glycoprotein family protein / MAM33 family protein (TAIR:AT3G55605.1); Has 195 Blast hits to 195 proteins in 67 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 64; Plants - 99; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink).1692e-012

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
63  100%

Unigene MembersMember information