 |
Information for unigene UN28224
| FASTA Sequence |
| Unigene ID: UN28224 | Length: 1335 |
SSR | | ATGCGCCTCCCCTCCACTCTCTCTCTCTCCCTCTCTCTCTCCCTTATCTCCTTATTATTACGTGAAGTCGCCGCCGCGTAAAAGCC
ATCGAATCACAACCGTTTCTCTTCACGAGATCTGACATTATTTAAAATCCTCAAAAGCTCTGATCTTGTCTGAACCGATCCATGTC
GGATCCCGATTCTCCGTTAGAACAAGATCCGATCCAGGATCCGTTACCCGCGCGTAACCAATCGTCTCCGCCGCAACCAGACGATT
CCGTTACAGATCTGAAAATCGCCTCCTCCACACCCGCGTCGGCGTCCAAGAACTCGAGGCGGTTGCCTCCGCCGTGCTGGTCTCTG
GAGGAGACGACCGCGCTCATCGACGGCTACCGAGACAAATGGCACGCTCTCAACCGCGGGAACCTCAAGGCGAACCACTGGGAGGA
AGTCGCGGAAGCGGTGGCCGGCAATTGCCCCGACGTGACGCCGAGGAAAACCGCCGTTCAGTGCCGGCACAAGATGGAGAAGCTGA
GGAAGAGGTACCGCACGGAGATCCAGAGGGCGAGATCCGTGCCGGTGGCGAGGTTCGTATCGTCTTGGGTCCATTTCAAGCGAATG
GAAGCCATGGAGGATCGGCCGGGGAGCAAGCCCGGCGGTGGAGAGGAGGAAAGAGACGAAGTTTATGGAGGAGGAGGTTCTGTCGG
AAGGACAAGGGCGATGTTTTTTAATAGGAATGGTACCGCCGGAGGGAGTAGCAGCAGCGGTGGTGGGATCAGGATTCGGATACCGA
CGGGAGTGAGTATAGCGCAGCCGGGTCCGAGGTTTCCCGGTAAGATCGATCCGAAATACACGGCGAGTGGAAGTTCGAGACTTGGT
CGTGTCGGAGCAGGATCCAGTTATGGAGGTAGGGGTGTGAGAATTGAAGGGGGAACAGGAAAACGTGGGAGGGAGATGATGATGAT
GACTACAGAGGAGGAGGAGGGGGAGAGGGAGGAGACTGATGATCCAATGGTGGAGATAGCGAGTGCGATCAAGCAACTTGGAGATA
CGTTGTTGAGAACAGAGGAGAGGAAAATGGAGATGACGAGAGAGATCGAAGCGATGAGGATGGATATGGAGATGAAGAGGACGAAG
ATGATATTGGAATCTCAACAACGAATCGTTGAGGCTTTTGCTAAGAGCATGTCTGAAAATTTGGAGGAGAAGAAGAAATCAAGAAG
ACTATCTTCCTTACCCAACGACTCTTGAACATCATCAACGAATAGTTGAGGCTTTATGTACTCATGTTTTTTTTTAAACATCATTA
ATGTATGTTGAACTTATGTTATAAAGTAGGGAGTTTTTAAAGCTC
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_182001 Alcohol dehydrogenase transcription factor myb/SANT-like protein [Arabidopsis thaliana] | 1174 | 3e-126 |
| XP_002327024 predicted protein [Populus trichocarpa] | 840 | 1e-087 |
| XP_002881977 transcription factor [Arabidopsis lyrata subsp. lyrata] | 623 | 2e-062 |
| XP_002301240 predicted protein [Populus trichocarpa] | 488 | 1e-046 |
| XP_002526477 transcription factor, putative [Ricinus communis] | 485 | 2e-046 |
| Swiss-Prot top hits | Score | e value |
|---|
| No hits found | | |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| O80512 Putative uncharacterized protein At2g44730 | 1174 | 2e-126 |
| B9MV52 Predicted protein | 840 | 1e-087 |
| B9GP79 Predicted protein | 488 | 7e-047 |
| B9SKE7 Transcription factor, putative | 485 | 1e-046 |
| A2Q1W1 MADF; Homeodomain-like | 403 | 5e-037 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G44730.1 transcription factor | 1174 | 1e-128 |
| AT3G24860.1 hydroxyproline-rich glycoprotein family protein | 235 | 8e-020 |
| AT3G10030.1 aspartate/glutamate/uridylate kinase family protein | 188 | 2e-014 |
| AT3G10030.2 aspartate/glutamate/uridylate kinase family protein | 188 | 2e-014 |
| AT4G17060.1 unknown protein | 178 | 3e-013 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|
