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Information for unigene UN28238

FASTA Sequence
Unigene ID: UN28238Length: 717 SSR 
TTGCCGAAAACATCCCGCTGGGATGAGAACCGCTCTCAGAGACCACCACAACGACGACGACGCGAGGTTTCACACCGTCGATTTAG
ATCGGATCCAAACAACCGTGACCGTCGTTGATGAGGTTAAGAAGAGCAAGAAGAAGAAGAAGAAAGTTGCGGTGGTGCCGTTGGCG
AAGGTATCGAGTAAAGAGGAAGAGACGGAGGAGAGATCGGGTGGTCCGATGTTGAAGCTCGAGTACGACGGCGTTTTGGAAGCTTG
GTTTGATAAAGCGACGCCGTTCGGGGAGGAGTCGGAAGTTACTACCGGAGCTGACGTGAACGCCAGATTAGCTCAGATTGATTTGT
TCGGAGACAGTGGAGTGCGAGAGGCAAGTGTTTTGAGGTACAAAGAGAAACGTCAAACTCGGCTTTTTTACAAGAAAATTAGATAC
CAAGTTCGAAAACTTAACGCAGATCAACGTCCTCGAGTGAAGGGACGATTCGTGAGAAGGTCCTGTGCAAGCCCTCCAAGTTGTCA
AAGATAACAAGGAAAAAAGAGAGCCAAGATTCACTCCTTTTATATTTCTTTCTTAGTTTTAAATTTATCTTTTTTTTTGAAATTTT
GTCATCCTCATTTTGGTTCTTTGATTTATGGTCTATGCCGTTTATAATGTAGGCTTTTCTTCCTTAATTAATCAAGAGAAATGAGG
GATTAATAAAAGTTTTTTTTTTGCTTTTG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_568852 chloroplast import apparatus 2 protein [Arabidopsis thaliana]4463e-042
XP_002864503 hypothetical protein ARALYDRAFT_495815 [Arabidopsis lyrata subsp. lyrata]4411e-041
NP_567737 CCT motif family protein [Arabidopsis thaliana]4095e-038
NP_851201 chloroplast import apparatus 2 protein [Arabidopsis thaliana]3997e-037
XP_002867585 hypothetical protein ARALYDRAFT_354188 [Arabidopsis lyrata subsp. lyrata]3862e-035

Swiss-Prot top hits (Blast detail)Scoree value
Q9LU68 Protein CHLOROPLAST IMPORT APPARATUS 24461e-043
Q9C9A9 Zinc finger protein CONSTANS-LIKE 71995e-015
Q9M9B3 Zinc finger protein CONSTANS-LIKE 81979e-015
Q8RWD0 Zinc finger protein CONSTANS-LIKE 161862e-013
Q8LG76 Zinc finger protein CONSTANS-LIKE 61834e-013

TrEMBL top hits (Blast detail)Scoree value
Q94KJ2 At4g259904093e-038
C0SVJ8 Putative uncharacterized protein At4g25990 (Fragment)3781e-034
Q9SZH3 Putative uncharacterized protein AT4g259903781e-034
B9HAY9 Predicted protein3512e-031
A5BV03 Putative uncharacterized protein3459e-031

Arabidopsis top hits (Blast detail)Scoree value
AT5G57180.2 CIA2 (CHLOROPLAST IMPORT APPARATUS 2); transcription regulator4479e-045
AT4G25990.1 CIL4092e-040
AT5G57180.1 CIA2 (CHLOROPLAST IMPORT APPARATUS 2); transcription regulator3993e-039
AT4G25990.2 CIL3789e-037
AT1G07050.1 CONSTANS-like protein-related2192e-018

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
121  33%
 
112  67%

Unigene MembersMember information