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Information for unigene UN28263
| FASTA Sequence |
| Unigene ID: UN28263 | Length: 1153 |
SSR | | GGTTTGCACTTGGAGTTTACGTTTCTTACACCTTTTGCTCATCTTCTTCTCCATCTTCATCATCATCATCAACTTCTACGTCTCCT
TCTTCTTCATCACCTTCTACGACACCAGAATGATATGTTCTCAAGAAGAAGTTGTGAGAAGGAGAACATTTATATATACTTTGTAA
ATGTAATATATTCTGTAATCTAATAAAGTTCTATTGATCGTGAAAGAGTTTGCTTTATTTATTTACTTTGGTATTGTCCAACAAAC
ATACAATTGTTATGGTTTAATTTAACTAATGATTATGACACAACATCTATGTTGCAAAATAAGAGGAAGAGAGAACCTGGCGGGAG
AGTTCTTGATGGTACAATGCGCCAGCAGATCCTTTGACACTGGTGAGATAATACCAACACTCAACAACATCCACTGTTGGCTGTTG
CATTTCCTCTTTAGACCCCATTTCTTCATCATCACGTGATCCGTTCTGACTACTAGGAGCAGACAAGAGCTTCTGCCCCATTTTCC
CGCTAAACTCACCATCTCCTTAGCCCTTACTCATAAGAGCATTCTGAAAAGCATCCTGCAAGCTCTTATCTGTACTCTCCCACTGT
TCTTGCTCTTTCCTCAAATATCCCTGCCTAATCCACTGTTCCCGTATAATCCTGACTCGCTCTCGCTCTTCTCATCTTCCTTCTCC
CATGCTCTGCCTCTCCAACACTCCCACAACTTCTTCAAAAACCCATCGAAAATCACCAATCACCTTTTCCCCTGAAAACGATGGTG
ACGGCCATTCGAACCCCGGTCCGCTTGGAACCGGATTCGAGGCGATTGGAACATAGAGTTGACCGGTTTCTTTGAAGGAGAAGATG
TGAGTGATGGAGGAGAGAGGAAGGGAAGAAGGAAGGGTTTAGGGTTTGACTGGAGAAGAAGGGATCCATATGAGTGGTTAGGATAA
GGTTTCCGGGCCTCAGGGAGGTGAATCTTCGGAGTCTCGATCGACGGATGAAAGGAGGAAACATTCGACTTCGTTGCGGCGAAGTA
TGGGTCTGCCACTTGTGGCCATTGAGAGACCTAACTGGGAAGCAAAGCATACAGCTTTTAGCTGCGTTGCTCTAGAGTTTAGTTCA
ATAGATCGGTTGAGCAATCAAAGCTTGAACCTTGG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_196112 vacuolar protein sorting-associated protein 36 [Arabidopsis thaliana] | 293 | 3e-024 |
| XP_002873175 vacuolar protein sorting 36 family protein [Arabidopsis lyrata subsp. lyrata] | 293 | 3e-024 |
| BAF00617 hypothetical protein [Arabidopsis thaliana] | 205 | 5e-014 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9FF81 Vacuolar protein sorting-associated protein 36 | 293 | 1e-025 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9HKI0 Predicted protein | 283 | 3e-023 |
| B9HVG5 Predicted protein | 232 | 3e-017 |
| B9RXJ8 Vacuolar protein sorting protein, putative | 214 | 3e-015 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G04920.1 vacuolar protein sorting 36 family protein / VPS36 family protein | 293 | 1e-026 |
| AT5G04890.1 RTM2 (RESTRICTED TEV MOVEMENT 2) | 124 | 5e-007 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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