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Information for unigene UN28366
| FASTA Sequence |
| Unigene ID: UN28366 | Length: 987 |
SSR | | GGATCTAAACACACAAATTCTATATCTTCAATATCTCCTCTTCCACACATTACTTAGCTCTTTTCATTCATATCAAAACATACAAC
CATGGAGATGAGTTTATTGTCGGAGTGCAAACAATCTTCTTCTCTCACTTTCTTGGCTCTCTTCAACTTGTTCCTGATCAGTTTTG
GGAGGTGGGTTTCTTCTGCTCGCATCTTTCTGTCCAGTTTCTTGCCTCTTCTTCAACGTGTGAGGAACCAAGACCAGAGTGTGATC
ACAAACATAGCAGAGCAAGAAGAAGAAGAAGACCAATATGATTATCTCTTTAGAGAAGACGCAGAGACGGTCATGAGAAGTCTTGG
TCTTTCGCCCGACCAAGAAAGCGACGACCTTAAAGAACGGTACAGTTCCAAGGAGATGTCGAGTTTGTTCGAAGAGAAAGAAGCGA
GTTTAGAGGAAGTGAAGCAAGCTTTTGATGTGTTCGATGAGAACAGAGATGGGTTCATCGACGCTACAGAGTTGCAGAGAGTTTTG
ACAATCTTGGGTTTCAAAGAAGGATCTCACCTAGAGAACTGCTCGGTTATGATCAGATCATTAGATGGAAACAAAGACGGAAGAAT
CGACTTCAACGGATTTGTTAAATTCATGGAGAGTAGCTTCTGCTAAAGAAATCGCATATGATTATTAATTCTTTTCACCAAATGTA
TTATTTTGTTCGTTTTACACTACTTTGCTTTCTTAATTCTTATCACTTCTGCGTCTTAGGATGAGATTGTGTATGTTAAAACCTGT
ACGGGTTAAAACAAACATGGTTGTTGTTGTCACTTGCCACTACTAATCCAAGGACTTTTTAGTAATTTCCAACTTACAACTTAAAC
ACACAAATAATCTCTTTTGCGGCATTAAATCGAACACCTTGCGCGCGCCCATTGCATAAGCGTTGACCAAGATCGTTGCTTGGAGC
TTTGAAGGCATATTATATGGGCAATGATTAACTAAAATCCT
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| GenBank top hits (Blast detail) | Score | e value |
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| XP_002875484 calcium-binding EF hand family protein [Arabidopsis lyrata subsp. lyrata] | 585 | 4e-058 |
| NP_568568 putative calcium-binding protein CML45 [Arabidopsis thaliana] | 579 | 2e-057 |
| XP_002870769 calcium-binding EF hand family protein [Arabidopsis lyrata subsp. lyrata] | 562 | 2e-055 |
| BAB08899 unnamed protein product [Arabidopsis thaliana] | 538 | 1e-052 |
| NP_189542 putative calcium-binding protein CML30 [Arabidopsis thaliana] | 452 | 9e-043 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q93Z27 Probable calcium-binding protein CML45 | 579 | 8e-059 |
| Q9MBG5 Probable calcium-binding protein CML30 | 452 | 4e-044 |
| Q9SN89 Probable calcium-binding protein CML47 | 203 | 3e-015 |
| Q9LNE7 Calmodulin-like protein 7 | 174 | 7e-012 |
| Q09011 Calcium-binding protein CAST | 168 | 4e-011 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| C6TB68 Putative uncharacterized protein | 384 | 5e-035 |
| B9IJZ4 Predicted protein | 365 | 8e-033 |
| B9T0T1 Calcium ion binding protein, putative | 364 | 1e-032 |
| B9H0C7 Predicted protein | 358 | 5e-032 |
| A5AJU7 Putative uncharacterized protein | 289 | 5e-024 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G39670.1 calcium-binding EF hand family protein | 580 | 5e-060 |
| AT3G29000.1 calcium-binding EF hand family protein | 452 | 4e-045 |
| AT3G47480.1 calcium-binding EF hand family protein | 203 | 3e-016 |
| AT1G05990.1 calcium-binding protein, putative | 174 | 6e-013 |
| AT3G07490.1 AGD11 (ARF-GAP domain 11); calcium ion binding | 168 | 3e-012 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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