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Information for unigene UN28411
| FASTA Sequence |
| Unigene ID: UN28411 | Length: 887 |
SSR | | ACGGCCGTTTCATTCTCTCTCACCAAACCCTAATTTACAATCTCCTCCCCCTCTCTCTCTCTCCCCTTCATCATACATCAAAATGG
ATCTCTCCGACGACGGCGCCACCGCTTCTCGACATCTACTCGATCCTTCTCTCTCAATCGTCCCCAGATCTGAAGACCCCACGACC
TCATCCACCGCGGCGGCGACTCCAACTACTTCCGGAGGAGCCGTCGTAACGAAGCGGTCGACGAAAGACCGTCACACGAAAGTCGA
CGGGAGAGGACGGCGGATCAGGATGCCGGCTCTCTGCGCCGCTAGGGTTTTTCAGCTGACGAGAGAGCTCGGCCACAAGTCCGACG
GCGAAACCATCGAGTGGCTTCTCCAGCAAGCCGAGCCGGCGATCGTCGCCGCCACCGGCACCGGAACCATCCCTGCGAACTTCTCC
TCTCTCAGCGTCTCTCTCCGTAGCAGCGGCTCCACTCTCTCCGCTCCGCCGCCGTCCAAGTCCGTGCCTCTGTACGGCGCTCTCGG
ACTTACTCACCACCATCACCATCAGTACGAGGACCAGGGAGGAGGCGCGTTCGGTGGTCACTTAGGGTTTCATCACCATCTTCAAC
CACAACAACAACAACATCATCAACAAGCTCAGGGGGAAACGATTCCACCGCACCGTTTCTCGAGTAAACGGTTTAGATCAGTTGAT
TCGTCTAAAGAAGAGGATGATGGGAAGCAGAGCGAGAACAAATCTTTGAAGGAAAGTGAACCTCCGGCGGGTGCCACCGGAGCTCC
GATGTGGGCTGTTGCTCCGACGAATAGGTCAGCCGGTGGAAACACCTTTTGGATGCTTCCGGTACCGACCACGACCACCGCCGGGA
ATCAGGCAGCTGCTATGGAGAGCAGCA
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_176107 transcription factor TCP8 [Arabidopsis thaliana] | 888 | 2e-093 |
| XP_002888231 hypothetical protein ARALYDRAFT_475419 [Arabidopsis lyrata subsp. lyrata] | 882 | 1e-092 |
| XP_002529010 transcription factor, putative [Ricinus communis] | 572 | 9e-057 |
| NP_001176811 Os12g0173333 [Oryza sativa Japonica Group] | 566 | 5e-056 |
| XP_002327254 predicted protein [Populus trichocarpa] | 530 | 7e-052 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9C518 Transcription factor TCP8 | 888 | 1e-094 |
| Q9LQF0 Transcription factor TCP23 | 479 | 3e-047 |
| Q53PH2 Transcription factor PCF3 | 478 | 3e-047 |
| Q93Z00 Transcription factor TCP14 | 411 | 2e-039 |
| Q9C9L2 Transcription factor TCP15 | 399 | 5e-038 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9SSP1 Transcription factor, putative | 572 | 6e-057 |
| Q2QX18 Os12g0173333 protein | 566 | 3e-056 |
| C5YSQ6 Putative uncharacterized protein Sb08g004600 | 535 | 1e-052 |
| B9MW99 Predicted protein | 530 | 5e-052 |
| C4IYP4 Putative uncharacterized protein | 525 | 2e-051 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G58100.1 TCP family transcription factor, putative | 888 | 9e-096 |
| AT1G58100.2 TCP family transcription factor, putative | 518 | 7e-053 |
| AT1G35560.1 TCP family transcription factor, putative | 479 | 2e-048 |
| AT3G47620.1 AtTCP14 (TEOSINTE BRANCHED1, CYCLOIDEA and PCF (TCP) 14); transcription factor | 411 | 2e-040 |
| AT1G69690.1 TCP family transcription factor, putative | 399 | 4e-039 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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