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Information for unigene UN28509

FASTA Sequence
Unigene ID: UN28509Length: 1300 SSR 
GCGGGAAGCCATTGTTTCCGGAGAAAAGCGTTGCTCATCAGTTGGAGTTGATTACTGATCTTCTTGGCACACCCAAATCAGAGACC
ATCTCTGGAGTTCGAAATGATAAAGCTAGAAAATACTTGAGTGAAATGAGGAAGAAAGAACCAGTCACCTTCTCTCAAAAATTCTC
CAAAGCAGATCCTTTAGCAGTCCGTCTTTTGCAAAGGCTGTTGGCTTTTGATCCAAAGGATAGACCTACTGCTGCAGAGGCGCTGG
CTGATCCTTACTTTAAGGGTCTTGCTAAGATTGAAAGAGAACCATCGTGTCAGCCAATCTCGAAGATGGAGTTTGAGTTTGAGAGA
AGACGGTTGACAAAGGACGACATTAGGGAACTTATCTACAGGGAGATATTGGAGTACCATCCTCAGTTGCTCAAGGACTATATTAG
CGGTTCTGAGGGTTCCAGTTTTGTATATCCTAGCGCCATAGGACATCTTAGGAAGCAGTTCAATTACTTAGAGGAGAATAGCAGTA
GAAGTGGGCCGGTTATACCTCCAGAGAGGAAGCACGTTTCACTTCCTCGGTCTACAGTTCACTCAAGTGTAGTCCATTCCACTAGC
CAACCCAACTTGTGTGCAACGGAGAGTAGACGCGTTCATTTCGAGCAGCCTTCAAGAAATGGAGCAGGACCTCCACCAAGAGTACC
ACCACCATCTGGTAGACCATCTGCATGTTATGAGAATGGCAGGAACCTCAAAGAAGCTTATTTCAGAAGCACAGTGTCATCTCCTC
ACTGTTGTTTCAAAGCAAACACCATGATGAGCACACCAGATAAAGCTTTTTTTCAGCCCAAACCGCAATACAATCACACCGTGCCG
CAACCACCTGCTAGGACTAACCAACCAAACGTCGATACTATTATGAACCGCCCAAACCCTTATTTCCAGTCACAGCACCCCAAGAT
AGACCAATCAAGCAACAACAACAACAACACACATAGGGCCATTGATCTGTTGCAAGCACAAACACAGTTTGGTCCAGCTGGAGCCG
CAGCGGTTGCAGTAGCAGCACACCGGAACGTAGTAGGCACAGTCAGTTACGGTGCAGCGTCATAAACTCATCAAACAAACAACAAC
TCGAGATAGATCTTTAACCAAAACCAGGTGATTCCGGCACCAGCTTTTTTTCATGTAAAGTATTGTTATTCAGGCAGGCTTTGATT
CGATGTAATAAAGACATTCAGATGTAGTAACTCACAAGAACAAGGTTCGGTTTAATTAGATCAGTCTGATCCAGGGTTGTTACCTG
TTATCGTTTC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002331327 predicted protein [Populus trichocarpa]10211e-108
XP_002894445 mitogen-activated protein kinase 18 [Arabidopsis lyrata subsp. lyrata]10192e-108
NP_175756 mitogen-activated protein kinase 18 [Arabidopsis thaliana]10149e-108
AAF78438 Contains similarity to ATMPK8 from Arabidopsis thaliana gb|AB038693 and contains a protein kinase PF|00069 domain. ESTs gb|T04165, gb|AI993011, gb|T21003 come from this gene10149e-108
ABG54345 double HA-tagged mitogen activated protein kinase 18 [synthetic construct]10149e-108

Swiss-Prot top hits (Blast detail)Scoree value
Q9C5C0 Mitogen-activated protein kinase 1810144e-109
Q9LUC3 Mitogen-activated protein kinase 199705e-104
Q5ZCI1 Mitogen-activated protein kinase 107861e-082
Q5SN53 Mitogen-activated protein kinase 87797e-082
Q9SJG9 Mitogen-activated protein kinase 207752e-081

TrEMBL top hits (Blast detail)Scoree value
B9N7T1 Predicted protein10211e-108
Q9XF36 Mitogen-activated protein kinase homologue9672e-102
B9SR58 Big map kinase/bmk, putative8991e-094
B9GGZ4 Predicted protein8963e-094
Q2QDD8 MAP kinase (Fragment)8669e-091

Arabidopsis top hits (Blast detail)Scoree value
AT1G53510.1 ATMPK18; MAP kinase10144e-110
AT3G14720.1 ATMPK19; MAP kinase9705e-105
AT2G42880.1 ATMPK20; MAP kinase7752e-082
AT5G19010.1 MPK16; MAP kinase6873e-072
AT1G73670.1 ATMPK15; MAP kinase/ kinase6685e-070

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
73  100%

Unigene MembersMember information