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Information for unigene UN28515
| FASTA Sequence |
| Unigene ID: UN28515 | Length: 707 |
SSR | | GGCAAGGGTGGAGACAAATCAAACAAGGACGAAGGAGTTCCCATGCCAGGAACTCGTGTTTCGAAAAACAAGAAGCTGAAGATCAG
CCAGCACAGACCAAGTGGGACCAGGGTTAAGTTTGATGAGGAAGGCAATCCAGTGGCTCCTTTAGCAATAGTAGCTGCTTCCGAAA
CTGAGACTGAAGTTGCTCTTGATGCAGAGGCAAGGAATGATTACTATAAGAAATTGGGAGAGCAACTGAGGAAAGTGGATCATGAG
GACAAGAAAGTGGAGAAGGAAAAGAGGAGGGAGAAGAGAATGAAAGCAAAGATTAAGAGGAAGCAAGGAGATATGGAGGAAGAAGA
AGAAGAAGAAGGTGATGAACGCTCTGCACCATCAGAAGAAGAAACTGGAAGAAAACGCAAAAGAGCGAAGAAGACGTACTTTGATG
ATAATGGTGATGGAGAAAAGGAAGGAGGAAAAATCAACACAGATTCTGTCTCCATAGCTGAGCTTGAAGAAATGGCTCTCAAATTG
ATAACGCAGTCATGAAAAGTTTCCTACACGAAACGTTTTCCCCTCTAGGCTTCCTCATCATCTGTGATTCTCCCAAGGAAGCATTC
ATTTTCTGAACCAATGTGATAGTTTCCGACAAGTTTTGTCTGTTTTTTTGTCAATCAAATCGTGTTACAAAAAGTTATTTTGTTTA
AAATTAATTAGCTTTTACC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002866065 hypothetical protein ARALYDRAFT_495573 [Arabidopsis lyrata subsp. lyrata] | 546 | 6e-054 |
| NP_200302 DEAD-box ATP-dependent RNA helicase 32 [Arabidopsis thaliana] | 520 | 7e-051 |
| XP_002319844 predicted protein [Populus trichocarpa] | 370 | 2e-033 |
| XP_002522952 dead box ATP-dependent RNA helicase, putative [Ricinus communis] | 355 | 9e-032 |
| XP_002278373 PREDICTED: hypothetical protein [Vitis vinifera] | 321 | 8e-028 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9FFT9 DEAD-box ATP-dependent RNA helicase 32 | 530 | 2e-053 |
| Q0D622 DEAD-box ATP-dependent RNA helicase 32 | 250 | 6e-021 |
| Q0CMM5 ATP-dependent RNA helicase dbp4 | 128 | 9e-007 |
| A1CTZ2 ATP-dependent RNA helicase dbp4 | 127 | 1e-006 |
| Q4P5U4 ATP-dependent RNA helicase DBP4 | 119 | 1e-005 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9I7V0 Predicted protein | 370 | 1e-033 |
| B9SAD3 Dead box ATP-dependent RNA helicase, putative | 355 | 6e-032 |
| B8B6M8 Putative uncharacterized protein | 250 | 9e-020 |
| B9FXI6 Putative uncharacterized protein | 250 | 9e-020 |
| C5XA14 Putative uncharacterized protein Sb02g034740 | 235 | 5e-018 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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