 |
Information for unigene UN28550
| FASTA Sequence |
| Unigene ID: UN28550 | Length: 704 |
SSR | | GGAGAGAGGATGTTGGTACATCTTCTAACGTTGTTGCAGACCAGATCTTCCTCTCCCCTGAGGTTCAAGAGTTCAGAAGATTTTCG
GAGAAAAGTGATGTATATGCTTTTGGGGTATTCCTTTTGGAATTAGTAAGTGGGAGAGAAGCATCAGAACCATCCCCTTCAAGCTC
AACACAAACTCTTGTCGAATGGATGCAAAGCATAACGGATTACACTGAGATACCAGAAATGATTGATGAGAGACTAGGTGGTACAT
ACACAGCAGAAGGAGTGGAGGAGGTTATTACACTGACATTAACATGTCTTGATGTTTCAAGTGAGAATAGACCAACAATGAGTTAT
GTTGTGACAGAGCTGGAGAGGATATTGGATAAAGAAGTGAGCTTAACAACAGTCATGGGTGAAGGTACTCCAACTGTTACTCTTGG
AAGTCAGCTTTTTAAATGATCAAAAAGTATACATATATATATATTTGAGAGGAGTATGAAGGAGAAGAAGACTGATCAGCTGTTTC
TGTTAAGTGTATAAAGAACAGCTGAGCTATTATTATTTGTTTGTTTGTTTTTTCCCCTCCTTTTTTCTACTTCCTTTGGAGGTTAT
TTTCAGCAATTTTTTTTTAAACGAGTGCAGAAAATATAACTTTGTAAAAAAACATTATTTATTGATGATATAAAAAGGAAGCAAAG
AGTGGAATGTTGTGTG
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| BAC43728 putative protein kinase [Arabidopsis thaliana] | 685 | 5e-070 |
| NP_189304 protein kinase family protein [Arabidopsis thaliana] | 685 | 5e-070 |
| XP_002875333 kinase family protein [Arabidopsis lyrata subsp. lyrata] | 684 | 6e-070 |
| CAA66819 hypothetical protein [Arabidopsis thaliana] | 603 | 2e-060 |
| XP_002303015 predicted protein [Populus trichocarpa] | 495 | 5e-048 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| O49839 Protein kinase 2A, chloroplastic | 193 | 3e-014 |
| Q9FZB1 Probable LRR receptor-like serine/threonine-protein kinase At1g51880 | 191 | 4e-014 |
| O80719 Probable receptor-like protein kinase At2g47060 | 172 | 7e-012 |
| Q9SJG2 Probable receptor-like protein kinase At2g42960 | 171 | 9e-012 |
| Q41328 Pto-interacting protein 1 | 166 | 3e-011 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q8GW09 At3g26700 | 685 | 3e-070 |
| Q38963 Putative uncharacterized protein | 603 | 1e-060 |
| B9GNF8 Predicted protein | 495 | 4e-048 |
| B9RGW0 Serine/threonine protein kinase, putative | 494 | 5e-048 |
| B9IA72 Predicted protein | 488 | 2e-047 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|
