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Information for unigene UN28552

FASTA Sequence
Unigene ID: UN28552Length: 1190 SSR 
AAGGAGAAGAAAGTCACCATCGACTTCGAGCCTTTCAAGCCCATCAACGCCTCCCTGTACCTCTGCGACAACAAGTTCCACACCGA
GCCTCTCAACGAGCTCCTCGAGTCTGATGATAAGTTCGGGTTCATCGTCATGGACGGGAACGGGACTCTGTTTGGTACTTTGAGTG
GGAACACGAGGGAGGTGCTTCATAAGTTCACTGTTGATCTCCCCAAGAAGCATGGGAGAGGAGGACAGTCCGCGCTTCGGTTCGCG
AGGCTGAGGATGGAGAAGAGACATAACTATGTGAGGAAGACGGCGGAGCTCGCTACTCAGTTTTACATCAATCCGGCGACGAGCCA
GCCTAACGTCCCTGGTCTGATCCTCGCCGGTTCGGCCGATTTCAAGACAGAGTTGAGCCAGTCTGAGCTCTTTGACCCTCGTTTAC
AAGCTAAGATACTCAACGTGGTTGATGTCTCTTACGGTGGGGAGAACGGTTTCAACCAAGCGATTGAGCTCTCAGCTGAGATTCTT
TCCAATGTGAAGTTCATTCAGGAGAAGAAGCTTATCGGGAAGTACTTTGAGGAGATTAGTCAAGACACTGGGAAGTACGTCTTCGG
CGTTGATGATACTCTAAAGGCGTTAGACATGGGTGCTGTTGAGACTCTTATTGTTTGGGAGAATCTTGATATCAATAGGTATGATT
TGAAGAACAACGCAACCGGGGAGATTGTGGTTAAGCATCTGGGGAAGGATCAGGAGAATGATCAGAGCAATTTTCATGATGCGGAG
AGCAATGCGGAGTTGGAAGTTGTGGAGAAGATGCCTCTGCTTGAGTGGTTTGCTAATGAGTATAAACGTTTTGGTTGTACGCTTGA
GTTCGTGACTAACAAGTCGCAAGAAGGGTCGCAGTTCTGTAGGGGTTTTGGTGGGATTGGTGGGTTGTTGAGGTACCAGCTTGATA
TGAGGACTTTTGACGAGCTATCAGATGGGGAAGTGTACGAAGATTCAGATTAAAGTGGTGTAAGATCTCAAAGAAGGATGGGGAAA
AAGAAAGAAAGAAAGAAAGAAGGAATGTTTTTTTTTACCTTTTACTGTCTCTGTAATATCTTCCTTTTGTCAAAACGTTCTACATG
ATTTTATGTCTGTCTCTTCTTATGTGTTTTCTGAAACAATGATGTTAAATGTATGAGAAATTTGAACTTTTT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
ACZ71035 eukaryotic release factor 1-3 [Brassica oleracea var. botrytis]16993e-187
NP_189295 peptide chain release factor eRF subunit 1 [Arabidopsis thaliana]16894e-186
XP_002875327 eukaryotic release factor 1-3 [Arabidopsis lyrata subsp. lyrata]16788e-185
ACZ71034 eukaryotic release factor 1-2 [Brassica oleracea var. botrytis]16511e-181
NP_172752 peptide chain release factor eRF subunit 1 [Arabidopsis thaliana]16431e-180

Swiss-Prot top hits (Blast detail)Scoree value
P35614 Eukaryotic peptide chain release factor subunit 1-316892e-187
Q9LPV8 Eukaryotic peptide chain release factor subunit 1-216434e-182
Q39097 Eukaryotic peptide chain release factor subunit 1-114761e-162
Q9VPH7 Eukaryotic peptide chain release factor subunit 112618e-138
Q9GR88 Eukaryotic peptide chain release factor subunit 112618e-138

TrEMBL top hits (Blast detail)Scoree value
D2K760 Eukaryotic release factor 1-316992e-187
D2K759 Eukaryotic release factor 1-216518e-182
Q147G8 At1g1292016437e-181
B9IA37 Predicted protein16194e-178
B9GYT2 Predicted protein16096e-177

Arabidopsis top hits (Blast detail)Scoree value
AT3G26618.1 ERF1-3 (eukaryotic release factor 1-3); translation release factor16901e-188
AT1G12920.1 ERF1-2 (EUKARYOTIC RELEASE FACTOR 1-2); translation release factor16443e-183
AT5G47880.1 ERF1-1 (EUKARYOTIC RELEASE FACTOR 1-1); translation release factor14769e-164
AT5G47880.2 ERF1-1 (EUKARYOTIC RELEASE FACTOR 1-1); translation release factor14769e-164

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
62  67%
 
81  33%

Unigene MembersMember information