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Information for unigene UN28578
| FASTA Sequence |
| Unigene ID: UN28578 | Length: 1340 |
SSR | | GGGACGAGCTCTGCATCTGGAATCTCTCACTAACATTCGTTCCCTCGCCGAATTCAATTTTCCCCGAGAAGTCTCTTCCTTTTTCT
CTCTCTCTCTGCTCCAGAAATCGGAAAAGATCAGATTTTTCTCCATTGATCGTGATTGGGTTTAAAAACTATGCATAGATCTGGCA
CAACAATGGCGTGGAACATTTTTAAATTCTGTACAGCTCTACGTGGACTCGGATCGATCATGATCCTTCTGGTCTTAGGGATCGTT
GGTGTGACCTATTACGCCGTCGTTTGGACCAATTACGGTCCCGCATTATTATCATCTGGAGGGCTCGCTTCTCTCGCAGCTCTCGC
CGTTATACTCATGTTTCATTTCTTGTTGGGGATGGTTTTGTGGAGCTACTTCTCTGTTGTGTTTACTGATCCTGGAGCTGTGCCTC
CTAATTGGAGGCCAGTTTCAGACGAAGAAGAGCAACAACAGGGTGAGTGTGATCCGTTGAATGGTTTGGAGTTTGGCGGGTTACAG
AACGATTCTTCCAACCAACGAACTCGGTTCTGTAGGAAATGCAATCAGCATAAGCCTCCTCGCTGCCATCATTGCTCTGTTTGTGG
TCGGTGTGTGTTGAAGATGGACCACCATTGTGTTTGGGTTGTTAACTGTGTTGGGGCCCTTAACTACAAGTATTTTCTTCTCTTCT
TGCTTTACACCTTTTTGGAAACAACTCCTGTGACTTTACTTCTCATGCCACAATTCATAGCCTTCTTTAGCGAGGAAGAGATACCT
GGAACTCCAGGCACCCTTGCTACTACTTTTCTTGCATTTGTTTTAAACCTGGCATTTGCTTTAAGCGTTATGGGTTTCTTAATCAT
GCACATCTCCCTCGTTGCTGCTAATACCACAACTATAGAGGCGTATGAGAAGAAAACAAGCCCGAAATGGCCTTATGACCTTGGTC
GAAAGAAGAACTTTGAACAAGTGTTTGGTACGGATAGGAAGTATTGGTTGATTCCAGCCTACTCAGAAGAAGATTTAAGACGAATG
CCTGAACTTCAGGGACTCGAGTACCCGTCAAAACCTGACTTTGATTCTCAAGATTTTTGAAGAAAAGGAAGGCTGTAACAATACCT
TAGGGATGACAGAGATAGAGAAGATGTTGTGTAAAGAGTTCCACGCCATTGAAGAAAGCTGAGACTAAAAGGCCTCCTAATCCTAA
TTCATACGACTAGATGTTCTTCTTCTTCTTTCATGAGTAGATATCATTTGATCTCTAGTTATAAATGTAGAGCCAAAGTCTCACGT
TGATAACAATCTTTACTGATCTTTCTGAATAGTCAAAATCCCTTTTGTTG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002882009 hypothetical protein ARALYDRAFT_903981 [Arabidopsis lyrata subsp. lyrata] | 1472 | 8e-161 |
| NP_191639 putative S-acyltransferase [Arabidopsis thaliana] | 1399 | 2e-152 |
| XP_002878349 zinc finger family protein [Arabidopsis lyrata subsp. lyrata] | 1396 | 5e-152 |
| XP_002511714 zinc finger protein, putative [Ricinus communis] | 1350 | 1e-146 |
| XP_002320722 predicted protein [Populus trichocarpa] | 1334 | 8e-145 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q8VYP5 Probable S-acyltransferase At3g60800 | 1412 | 3e-155 |
| Q94C49 Probable S-acyltransferase At4g22750 | 975 | 1e-104 |
| Q5M757 Probable S-acyltransferase At4g00840 | 802 | 2e-084 |
| Q5W0Z9 Probable palmitoyltransferase ZDHHC20 | 425 | 8e-041 |
| Q0VC89 Probable palmitoyltransferase ZDHHC20 | 418 | 5e-040 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9RDC5 Zinc finger protein, putative | 1350 | 7e-147 |
| B9IBZ4 Predicted protein | 1334 | 5e-145 |
| A5AWP6 Putative uncharacterized protein | 1310 | 3e-142 |
| B9GPF8 Predicted protein | 1309 | 4e-142 |
| C6TC80 Putative uncharacterized protein | 1281 | 7e-139 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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