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Information for unigene UN28612

FASTA Sequence
Unigene ID: UN28612Length: 1369 SSR 
CAGAGCTAATGCTTTTAATCTAAACGTGAAAAATCTTTGGACCAAACACTGTTTCTCCCTTTCCAGATTACAAGAATTGTTCCCTC
CCTATCTCACAACTGATAATAAACACATCAAAACGCAACCCAAAAAAGAAAAACACTATATAGCAGCAGCAAATCTCAACCTCACA
TCTCTCACTTCCATTTCCATAAGCATGCTCTATGACGCAGCCTCTTCTCCGAGTCATATTCAAAAAGTTTTAGGCTTTTTCCCCAT
CACGTCTCTGACTCTTCTGCTTCTTCATCTTCAACTACAGTCGGGAGCGTTCCCTCTCTGCTGAAACTAGGGTTTAAGAACTTTGC
CACAAAAGCCCACAACTTATAAACATCTTCAAAGTTCGTCAAAAAGCTCAAAGATGCCGTCACAACCTCAAATCTCACATACCCTC
CTCCTCCTCTCTTACCACCACCTTCTCTCTGCAGATGCAAAGAGCCCTCCTCCTTCATCCTACCTCCTCCTCCCCCACGTTGATGA
TGGTTTCTCGGCACATCCATCATCCGTATGTGACTCAATATCCCAATACCAAGACACACACCTTCTCTCTCAGCAAGTTTCAGCAC
AACCTCTGGACTCACAAACCCTTTGCTCTTGTCCTTCACGTTGAAAGCAACCGCCGCTCCTCTCTCGTACTTTATCTTCGGCCCAT
ATATCTGCACAAGACTCCCTGTTTCAGGCACCTTGAGCTGCAGCAAAGAGATCACAAGCCAGTTTATCAGAAACCTCAGCCTAGTC
GTGGTTTTACTAAGACCTAACATATTCACATGATCGATATGGCTGCAAACAATCTCAGGCTCCCTTCTCTCCCAATCATCCTCGTT
CTGATTCTCACCATCATCACCACTTTCTTCGTTATACAAAGCTTCACCTTGGTCCAGACTATGACTGACACGGTCCACGTTAAACG
AGACCCTTGTCCCTCTGCTCGGCTGTTCATCTTCAACACCCATAAGCCTCCCTCCTCTTCTTCCAAGTAACCTAAACTCCCCTTCC
GTCTCTCGTCTAATAGCATTCTCTTTCATATCAGAGCAAATCTTGGAGCTTGTCCCAAACCCACACTGCTCTTCTTCTTCTTCTTC
CTGTATCTCTCGCGTCAGGAGACTACTATTGGAGCTCCTCAGGTGGCTCCGCGACGGAGTTGTCTCCTGAGCAGCCGACATAACCG
CAGCATCAAACGAGAGGACATCTTTACCATCATACATAGGACTGCTGTAATAACAACTCTTTGCCGCAGCAGCAGGTCTAGGCGAC
TGGCGTTTGCTTGTGAACCAGAACGGTGGCAAAGGGGAGGCTATTTTATTATGGTGGTTCATGGGGTCAGAGCCAAGCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002880510 hypothetical protein ARALYDRAFT_481220 [Arabidopsis lyrata subsp. lyrata]13751e-149
NP_179933 catalytic/ pyridoxal phosphate binding protein [Arabidopsis thaliana]13671e-148
XP_002869008 hypothetical protein ARALYDRAFT_912653 [Arabidopsis lyrata subsp. lyrata]7343e-075
NP_195427 catalytic/ pyridoxal phosphate binding protein [Arabidopsis thaliana]7334e-075
XP_002310171 predicted protein [Populus trichocarpa]6771e-068

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q9FGD5 Emb|CAB16785.18069e-084
A5AMA2 Putative uncharacterized protein8051e-083
O23176 Putative uncharacterized protein AT4g371007333e-075
B9H6B5 Predicted protein6778e-069
B9HEF2 Predicted protein6778e-069

Arabidopsis top hits (Blast detail)Scoree value
AT2G23520.1 catalytic/ pyridoxal phosphate binding13702e-151
AT4G37100.1 catalytic/ pyridoxal phosphate binding11166e-122
AT5G66950.1 catalytic/ pyridoxal phosphate binding8065e-086
AT5G51920.1 catalytic/ pyridoxal phosphate binding1982e-015
AT4G22980.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 9 growth stages; BEST Arabidopsis thaliana protein match is: catalytic/ pyridoxal phosphate binding (TAIR:AT5G51920.1); Has 294 Blast hits to 268 proteins in 91 species: Archae - 4; Bacteria - 15; Metazoa - 79; Fungi - 66; Plants - 107; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink).1327e-008

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
94  100%

Unigene MembersMember information