 |
Information for unigene UN28631
| FASTA Sequence |
| Unigene ID: UN28631 | Length: 1286 |
SSR | | GACGAAGAAGATATATTGATTTGAGATTAATGTAAATCATCAAGTTTTCAGGTATTAAAAGCTATCAATTCATCAGAGATGGCTTA
CTCCTATATTGTGCGTGCAGGAAACAAAAACTGAATTTTCTTTTCGAGGAAACACAAGCTCCCGTGTACTGAGAAACTCTTATTAA
TGATCACTAAGAATCCAAAATGGTGAATTATGTAACTTTTAATCACTTTTTCTTTTCCTTTCAAGTGTTCTTCGAAGCTCTTCACT
TCCGGTACTGTCGAAGCTCTTTTACAACACCGTCGGTCAACGAGTCAACGTCATGATTCTTCCCGTAGAATTTCACAAAATTCATC
TCCGGGCTCATCAAGTACATGACAATGGAGTGATCAACGAGATAGTCTGAATCTTCCTCTTCCGTCTTCATGTAGTAAACCCGGTA
CGAACGTGCCACCGATTTGATTTCTTCAGGGGTCCCGGTTAACCCGATCAATTTCGGATGAAACTCTTTGACATATTCATGTACTT
GTTGAACTGTGTCTCTTTCAGGATCCACAGAGATAAACACCGGCACCACATCCACTCCCGACTTTTCCTTTATTTTGTCAATGGCA
GCAGCTAGCTTAATAAGCTCGTCAGGACAGATATCAGGACAATGAGTGAACCCAAAGTATAAGATGGTCCATTTCCCCATCAAGTC
TTTCTCCGTAATACGCTTCCCATCATCTCTTATAAGGCTGAATGGTCCTCCAATAGCTGCCTTTCCAGCTGATGGTCCCTCCTTGA
CGGCTTTAGAATTGGTATTTATATCTTCTATATGACGTTTCTTTTCCCGATCATAGTAGTAGACCAGTCCAGCTCCAGTAGCAAAC
AGCAAGAAGAAGCTCATCCACGAAACCGGCGCTCCACGAGCGTTTTTCCCAGATGCACGGTCGCTTTTCTGATCAGAACCGCCATC
AGATCCTCCAGATTCCTCGTTTTCACCGGAGGATTTCGTCTCCGTATCACCAGAGCTAGGCTTAGAGGCTGTACCAGAAGCAGACG
TGCTCATCAAACATCTCCGATCCATCTCTAACCGTTCGATTCCACCGCTAAGTGAGAAAAACGATCGAGGAAGAGAGAAATCTCCA
TGATCGGAGATGCACGGCGGAGGCGGAGACGACGAAGACAGTAGATCGCTTGAGGCGCGGATTCGGCGAAAAATCTGAACGGGGCG
AAGACGGCTTGCGGTTCTACAAAGAGCAGACGCCATTGACGACTCGACTTCTCTCTCTCTCAACTCCACAAATTCGCTGGGG
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002882593 electron transport SCO1/SenC family protein [Arabidopsis lyrata subsp. lyrata] | 1502 | 2e-164 |
| NP_566339 electron transport SCO1/SenC-like protein [Arabidopsis thaliana] | 1496 | 1e-163 |
| AAF07830 putative SCO1 protein [Arabidopsis thaliana] | 1261 | 2e-136 |
| XP_002263427 PREDICTED: hypothetical protein [Vitis vinifera] | 946 | 7e-100 |
| XP_002323592 predicted protein [Populus trichocarpa] | 929 | 7e-098 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| O75880 Protein SCO1 homolog, mitochondrial | 518 | 1e-051 |
| Q5SUC9 Protein SCO1 homolog, mitochondrial | 508 | 2e-050 |
| A1A4J8 Protein SCO1 homolog, mitochondrial | 496 | 5e-049 |
| O42899 Protein sco1 | 454 | 3e-044 |
| P23833 Protein SCO1, mitochondrial | 446 | 3e-043 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q8VYP0 Putative SCO1 protein | 1496 | 8e-164 |
| Q9SR94 Putative SCO1 protein | 1261 | 1e-136 |
| B9IGB6 Predicted protein | 929 | 5e-098 |
| C5XVE3 Putative uncharacterized protein Sb04g004150 | 921 | 4e-097 |
| B4F7T4 Putative uncharacterized protein | 910 | 7e-096 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G08950.1 electron transport SCO1/SenC family protein | 1497 | 3e-166 |
| AT4G39740.1 electron transport SCO1/SenC family protein | 414 | 1e-040 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|
