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Information for unigene UN28638

FASTA Sequence
Unigene ID: UN28638Length: 1451 SSR 
GGGTAGTAGATTTTGAGGGCTTAAAACTCTCTATTTGTGCGTGCCAGATTCACTCACTCTCTTCCTCTTCCTCTTCTCCGCCGCCT
CAAGACCTCATCGGTCTCCGTCTGTATCTTCTTAAAAAGATTCTCAGTTGTTTCTGCCAGGCGTAGATAAGTCGTTGAAGTAGTAG
CTGATGATGATGATGACTTCGGCTCCTCAGTCACCTAACTTCTCTGGTGGTCTCCGATCACAACCTTCTTTCCTCGTTGAGCAGGA
GAAGTATCTTTCTGAGTTACTTGCAGAGCGTCAGAAACTTACTCCCTTCTTGCCTGTTCTTCCACATGTCTGCCGTCTCATGAACC
AAGAAATATTGCGTGTAACCACGCTGTTGGAGAATGCCATAAGTCAGAGTAGGTTTGATCACCCTAGCCCTCTGTCTTCTGGAGGG
ATATTCCAGAACTCAAGAGCTGACATGAACGGATGGCCCTCTCAATTTCCATCAGAAAGATCTGTTTCATCATCTCCAGCACCCAA
TTGGCTAAACTCTCCTGGTAGCTCCTCAGGTCTCATCGTAAAACGAACAATCAGGGTGGATATTCCAGTCGACCAATACCCAAACT
ACAATTTTGTCGGTCGACTCTTGGGTCCTAGAGGAAACTCTCTCAAACGAGTTGAAGCTAGTACTGATTGCCGTGTTCTTATTAGG
GGGAGAGGCAGCATTAAAGACCCGGTTAAGGAGGAAATGATGAGAGGGAAGCCTGGTTATGAGCACCTGAACGAACAACTCCACAT
CTTAATCGAAGCAGAGTTACCCATTGAGTTAGTCGATGCACGTCTTATGCAAGCTCGTGAAATCCTAGACGATCTACTTACTCCTG
TGGAGGAAACACATGACTTCTACAAGAAACAACAGCTCAGGGAACTGGCCCTACTCAACGGTAGTTTTCGAGAAGAAGGATCTCCA
ATGTCTGGTTCCGTCTCTCCTTACAATAGCCTCGGCATGAAGAGAGCCAAGACAAGGGACTAATGTTAACAAAAGTCAGTTTCCAT
CTTTTTCAAAGCTTGCCTCTTATCACCTTTTCTCAAGAAGGTAATATATGCCACCGTTACAGCACAAGAAGAGGCTTTTGAAGGTT
CTGTCTCCATCCCTATCCTACTACTTCCATACTCATCTGGCTACCGGAACTCTTTCTTATATCCCTGGAATAATAATAAAAAAAAA
CTCCCGTCCTATATGAATGAGTCTGTGTCTGACAGAAGTACAGGCAGAGCAAGGGGTTAGTCTCTGTTTGTGTATCTGTCTCTGTC
TGTTAATGTTGGCTTGATTTTTGGTTTAGTGGAGACTACTAATAAGCTTTTGTTGTTTAAAAGCAAGTTTTTTTTGTGGGGGTAAA
ACATTATATGGTTTGTGTGTGTTTGAGTAATGAATTATTCTGTTTGCATTAAACATTAAAACATAGTTTGTTACC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
AAM14070 unknown protein [Arabidopsis thaliana]13527e-147
CAA18222 putative protein [Arabidopsis thaliana]13527e-147
NP_194378 RNA-binding KH domain-containing protein [Arabidopsis thaliana]13527e-147
XP_002867563 KH domain-containing protein [Arabidopsis lyrata subsp. lyrata]13402e-145
NP_200425 RNA-binding KH domain-containing protein [Arabidopsis thaliana]12594e-136

Swiss-Prot top hits (Blast detail)Scoree value
Q0WLR1 KH domain-containing protein At4g2647513523e-148
Q9FKT4 KH domain-containing protein At5g5614012592e-137
Q8GYR4 KH domain-containing protein At3g086207152e-074
Q9ZVI3 KH domain-containing protein At2g386107062e-073
Q8GWR3 KH domain-containing protein At1g096606605e-068

TrEMBL top hits (Blast detail)Scoree value
B9T3W9 Nucleic acid binding protein, putative10523e-112
B9GHJ4 Predicted protein10514e-112
B9N5K8 Predicted protein10416e-111
C5XZS7 Putative uncharacterized protein Sb04g0295209807e-104
C0PIK4 Putative uncharacterized protein9762e-103

Arabidopsis top hits (Blast detail)Scoree value
AT4G26480.1 KH domain-containing protein13523e-149
AT5G56140.1 KH domain-containing protein12592e-138
AT3G08620.1 KH domain-containing protein7161e-075
AT2G38610.1 KH domain-containing protein7062e-074
AT2G38610.2 KH domain-containing protein7062e-074

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
73  100%

Unigene MembersMember information