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Information for unigene UN28661
| FASTA Sequence |
| Unigene ID: UN28661 | Length: 1228 |
SSR | | GACAGAAACGAGAAAAAATACAACGAGTTAGAACTAGATTGACCAAGTTTTAGCCTTGTGCAGCTTAAAACAAGTCAACACAGAAC
ATAACATAACATAGCCTTCTGAAGAAGAAGAAAAAAAACATAAACTTGACAAGCATGAAGAACCAGCTAGTACTACTCATCAGATA
ACTATGAGAATAAGAAAACTGTTGTAAAACAATCATAATTAACTGAAGCTCCTCAGAGTTGCAAACAAAAGAGTGCTTATTCTGCT
ACTTCTTAGCTTCATCTCTGGCAACAATCTTGTACTTTCCGCTTTCCTGTTGCCTTTCCCAAAGTTTAGTATGCTCACTACAAAAC
CCAACAACAATGCCACCGCTCCTCTTGCTTTCACGGTACTCAATGCAAAGATCATCCTTCAACCCACAAGTAACATGAAAAGCCAG
CTGGCACCTCATCTCCGAACACTCGATAACACACCCGTGTCTAATCTTGCACAAGTAACACCTCTCTTTCCACCTCTTACTCGGTA
TCTCGCTGCAACAGATCCCTTCCCTTCCTTCAGGATCCTCGAAGTAGACTTCCGGCACGAACAAGGCGCAAGCGATGTGAGCCCAC
CGACCATCCTTCGTCGGTTTCACCGCTCCACCTTTGGTCCTACACAAGCAGCAAGAGAGAGACTTTTTTTCTCTGCTCTTCAACGC
AGTACAGTGACTGCAAAACCAGTCACCTTCGGGTATGGCTTTAACCAGAGGGTTACCGTAACAAGAAGCGTGGACCATTAAGTCGC
AACCGTCGCAGAAGACGATTGGATTTGATGGCTCACCATCTGTGCTTTGACATACAGCACACACAATACCATCTTCTTCACCACAA
TCTTCAGGGATTGAATCTGATAGATCTAAACCTTCTTCTTCCCCCAGAGGATCTATATTCTCTTTGTTATTGTCGTTTTCTTCACT
CGATTCAAGAGTTGGATTCTTCTTCTTCTTCTTCTTCTCGGTTCTGCCCTCGTCTACACAAGGCTTATACTCAATGTTCAGATCGA
AAGGCGAAAACGGATTATTATCACCGGAGAGCAGATCTGGATCGATCGCCCATATCCTCTTCTTCGCCGGGAGACAACAACGCTGG
ATGGGGACTTCTTCGGAGTTCTCATCGTCGTAATCAAGACGAGAATGCTTCCTCTTCTTCGCCGGCAACTGCTGCGACGGCTTCAC
CTCCTCGGATTGGCTCGTTCGCTG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_974313 RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana] | 1292 | 5e-140 |
| XP_002885053 predicted protein [Arabidopsis lyrata subsp. lyrata] | 1285 | 3e-139 |
| NP_566491 RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana] | 1261 | 2e-136 |
| XP_002531248 mixed-lineage leukemia protein, putative [Ricinus communis] | 971 | 9e-103 |
| XP_002283700 PREDICTED: hypothetical protein [Vitis vinifera] | 938 | 6e-099 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9LUC1 Genomic DNA, chromosome 3, P1 clone: MIE1 | 1292 | 4e-140 |
| Q8L8P1 Similar to zinc-finger protein | 1261 | 1e-136 |
| B9SZ29 Mixed-lineage leukemia protein, putative | 971 | 6e-103 |
| B9N7S5 Predicted protein | 922 | 3e-097 |
| C5XMM2 Putative uncharacterized protein Sb03g003580 | 741 | 3e-076 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G14740.2 PHD finger family protein | 1293 | 1e-142 |
| AT3G14740.1 PHD finger family protein | 1270 | 7e-140 |
| AT2G31650.1 ATX1 (ARABIDOPSIS HOMOLOGUE OF TRITHORAX); histone-lysine N-methyltransferase/ phosphatidylinositol-5-phosphate binding | 310 | 1e-028 |
| AT1G05830.1 ATX2 (ARABIDOPSIS TRITHORAX-LIKE PROTEIN 2); DNA binding / histone methyltransferase(H3-K4 specific) | 290 | 3e-026 |
| AT1G05830.2 ATX2 (ARABIDOPSIS TRITHORAX-LIKE PROTEIN 2); DNA binding / histone methyltransferase(H3-K4 specific) | 290 | 3e-026 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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