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Information for unigene UN28665
| FASTA Sequence |
| Unigene ID: UN28665 | Length: 980 |
SSR | | GGGAAGTGCGGGGAAAGTGTATAGGGTTGATCTGAAAAAAGGTGGTGGGACAGTGGCGGTTAAGTGGCTGAGGAGAGGAGGAGGAG
GAGGAGAAGAAAGCAACGGAACAGAGGTCTCTGTTTCAGAAATGGAGATTCTTGGGAAAATCAGACATAGAAACGTGTTGAAGCTC
TACGCTTGTCTTGTCGGAAGAGGTTCTAGTTACTTGGTGTTTGAGTTCATGGAGAATGGGAACTTATATCAAGCTCTTCGCCGGAG
TATTAAAGGTGGATTACCTGAACTGGATTGGCACAAGAGGTATAAAATCGCGGTAGGGGCAGCTAAAGGAATCGCTTATTTGCATC
ATGATTGCTGTCCTCCGATCATTCACAGAGATATAAAGTCTAGTAACATTTTACTTGATGGAGATTATGAGTCGAAAATTGCGGAT
TTTGGAGTTGCAAAAGTTGCTGACAAGGGATATGAATGGAGCTGTGTTGCTGGAACTCATGGCTATATGGCACCCGAGCTGGCTTA
CTCCTTCAAGGCAACCGAGAAGAGTGATGTGTACAGCTTTGGCGTGGTTCTTCTAGAGTTAGCTACCGGTCTTCGGCCAGTGGAGG
ACGAGTTTGGAGAGGGAAAAGACATTGTTGACTATGTCTTCTTTAAGATTCAACAAGATCGGAGGAACCTTGGAAAAGTCTTGGAC
AAGCAAGTTTTGTCAACTTACGTAGAAGAAAGCATGGTTAAGGTTCTGAAAATGGGTTTTCTATGTACTACAAAGCTCCCGAGTCT
CAGGCCAAGCATGAGAGATGTCGTGAGAAAGCTTGAGGACGCTGATCCATGCGTCTCCAATTCTCTAGACAGAACCGGAAAGATTA
CAGTATAGGTTAATGAGTTGGGTTAAGTTGATTACCTGTTTTGGTGAGACTAGTTACAAAAGTGTCGGTTTGTTCACAACTACGAG
AGACTAGTTCTTCGTATCTATTAAATTTGCAGCG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002887421 hypothetical protein ARALYDRAFT_476351 [Arabidopsis lyrata subsp. lyrata] | 1370 | 3e-149 |
| NP_177363 leucine-rich receptor-like protein kinase [Arabidopsis thaliana] | 1355 | 2e-147 |
| BAF00973 putative leucine-rich receptor-like protein kinase [Arabidopsis thaliana] | 1355 | 2e-147 |
| XP_002325963 predicted protein [Populus trichocarpa] | 899 | 1e-094 |
| XP_002521777 Receptor protein kinase CLAVATA1 precursor, putative [Ricinus communis] | 892 | 9e-094 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9FII5 Probable leucine-rich repeat receptor-like protein kinase At5g61480 | 595 | 1e-060 |
| P47735 Receptor-like protein kinase 5 | 591 | 3e-060 |
| Q9SGP2 Receptor-like protein kinase HSL1 | 580 | 6e-059 |
| Q9LHP4 Receptor-like protein kinase 2 | 540 | 3e-054 |
| Q9SYQ8 Receptor protein kinase CLAVATA1 | 527 | 8e-053 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q0WPH6 Putative leucine-rich receptor-like protein kinase | 1355 | 1e-147 |
| Q9C7T7 Leucine-rich receptor-like protein kinase, putative; 28019-31149 | 1355 | 1e-147 |
| B9IQE2 Predicted protein | 899 | 9e-095 |
| B9S708 Receptor protein kinase CLAVATA1, putative | 892 | 6e-094 |
| C6ZRU4 Leucine-rich repeat transmembrane protein kinase | 865 | 8e-091 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G72180.1 leucine-rich repeat transmembrane protein kinase, putative | 1356 | 5e-150 |
| AT4G28650.1 leucine-rich repeat transmembrane protein kinase, putative | 633 | 4e-066 |
| AT5G49660.1 leucine-rich repeat transmembrane protein kinase, putative | 616 | 3e-064 |
| AT5G61480.1 leucine-rich repeat transmembrane protein kinase, putative | 595 | 1e-061 |
| AT4G28490.1 HAE (HAESA); ATP binding / kinase/ protein kinase/ protein serine/threonine kinase | 591 | 3e-061 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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