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Information for unigene UN28688

FASTA Sequence
Unigene ID: UN28688Length: 799 SSR 
AGAAAAAAACCACTCAGCTCTCCGCACCATGTATAGTGGGAAGAACTCTTTTTCGAATCTGAACGTCTTTTAAGCTCAAAAAAGAC
GAGCATTCCCCAGAAAGACATCCTGTCACCTAATCCCCGGAACTCGAGGAAGAGGAAAGAGCCCAGATATGAACAGAGATTTGGTT
TTCTAAAGGTTCCAACTTTTTTTCTTGCCCAGATTTAACAGAGGAGCGCGTTTTTGAAAGAACGCAACATACGCAATCTCTCTCTT
ACTTGTTGTCTTGCAGAGTGTTTCTCTTTCAGTGTGATTCCAAACTACAGTAAAGTTGTTTTTAGTTCTATTGGATCTTGAGTTGT
TTTGTTCAAATAAAGGTCTTATCAATGTCTGTAAAGTAGATATTCCTAGGAATTAAACATCTACGTGAACCTTTTGTGGTCTTGTG
ATCCTGTCTTGATGGGTAAAGAGAATCAGTTGGAGACAGCAAACTGTGGAGTCAATGATCACGATTCTCCACCGATCAAGAACGAG
GAACTAGCTGCCGTGGCGCGTTACAGTACAGACAGTGACTCAGGGTTACCGACTTGTCGTGTATGCCATTCTGCAGAATCCGACAA
ACGAGGAGATACTGCCTTAGGGTTCTTGGGGATCACTGCTACAGTTCTTAAAACCGAAACAGTTGATGATGATGATGATGATGCTG
CTGAGCAGAAGAGTTCCATTGATGATGATATCGAAATGGGAATGGTGCAGCACCAGGATCCATTGATGAGCTTGGATGTTCTTGCA
GACGAGCTTGCTTTGGTACACTACG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002864866 zinc finger family protein [Arabidopsis lyrata subsp. lyrata]3442e-030
BAB10471 unnamed protein product [Arabidopsis thaliana]3433e-030
NP_201183 RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana]3433e-030
AAL14416 AT5g63780/MBK5_26 [Arabidopsis thaliana]2752e-022
XP_002871357 zinc finger family protein [Arabidopsis lyrata subsp. lyrata]2752e-022

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q8GUG6 At5g637803432e-030
Q9FFN6 Gb|AAD32776.13432e-030
Q93ZD2 AT5g63780/MBK5_262751e-022
Q9C5A2 At5g087502742e-022
A5BQA0 Putative uncharacterized protein1829e-012

Arabidopsis top hits (Blast detail)Scoree value
AT5G63780.1 SHA1 (shoot apical meristem arrest 1); protein binding / zinc ion binding3431e-032
AT5G08750.1 zinc finger (C3HC4-type RING finger) family protein2741e-024
AT5G08750.2 zinc finger (C3HC4-type RING finger) family protein2741e-024
AT5G08750.3 zinc finger (C3HC4-type RING finger) family protein2651e-023

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
61  50%
 
101  50%

Unigene MembersMember information