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Information for unigene UN28718

FASTA Sequence
Unigene ID: UN28718Length: 1229 SSR 
TTTTTACCACTCTGTTCTTCATCGATAACACTATTTATCTGTGACTCTTCCCATTTCTTTTGTTTGTTGTTGATCATCTTCCCTTC
ACTGTCTGTAACTGTCTTTTTTTTTCTTACATGCCACAACACATGTCAGACACTCATCATGTTCAGGTTCAGGGCTCTGCTGTGTC
TATTCAATCTTCCGACAAGATCGAAGATGCCTTTAAGAAGATGAAAGTGGATGAAAAGAAAGTGTTGGAATCTAATGCGTATCCGG
TTCGTCCTGGTGAACGAGACTGCCAGTACTATCTAAGAACTGGTCTATGTGGCTATGGAAGCAGTTGCCGTTACAATCATCCCACT
CCTCTTCCACAGGGTATTATGTATCACAACGAGGGGCTCCCTGAGAGGATTGGTCAGCCGGATTGTGAGTATTTTCTGAAGACAGG
AGCTTGTAAGTATGGTTCAACTTGTAAATACCATCACCCAAAGGACAGGAATGGAGCAGAACCTGTGTTGTTCAATGTTCTCAGTT
TACCTATGCGTCAGGGTGAGAAGCCATGTCCATTTTACCTGCGAACGGGAACATGCAGATTCGGAGTTCCTTGCAGATTCCACCAT
CCTCAACCTGATAATGGAGGACATTCTACTGCTGCATATGGGACGTCTAGTTTTCCTTCTGCAGGTGGATTAACAATGATGTCTGC
ATATGGAGCTTTGACTCGTCCACAACTTCCTCAGTCCTATGTTCCTTTCATGGTGTCACCCTCTCAAGGCCTTTTGGCTCCTCAAA
GCTGGGCCACTTACATGGGACAACCAGCTTGTGGTAACGTCAAGTCTTATGGATTCTGCAAGTTTGGACCAAACTGCAACTTGGAC
CATTCAGTGCTGCCATACCCAGGCTTTACCATGCCTTATGTTTCACCTGTTTTATCAAATTATCAGAGGATCACACCATCTCCAAG
CCGCTCTGGTTCAAAGACCAACGACAAACCTGATGTTAAGAAAGACATGTTGAGACTTAGAAACCAGACGATGATTCTAAACGATT
AACTCCCAAATGAAGAAATGATCGTCATCACCATGATCACATTCACAGCTTTCAAAGATCTCTCTCTCTCTCTCTCTCTCTCTCTC
TCTCTGCCCATTTTTTGTTAGCTTTTGTGGGAAGATGAGTGGAGGTGGAAGTATTTCTCTCTTTTGTATGGAAACAATATAGGACT
CTCCTGTTTTCGTTTGTTTTGACTC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002892258 predicted protein [Arabidopsis lyrata subsp. lyrata]9672e-102
NP_563725 zinc finger CCCH domain-containing protein 3 [Arabidopsis thaliana]9413e-099
AAF40461 Contains similarity to zinc finger protein from Arabidopsis thaliana gb|AC018363. EST gb|AA713271 comes from this gene8956e-094
XP_002881253 hypothetical protein ARALYDRAFT_345050 [Arabidopsis lyrata subsp. lyrata]8274e-086
NP_565758 zinc finger CCCH domain-containing protein 26 [Arabidopsis thaliana]8014e-083

Swiss-Prot top hits (Blast detail)Scoree value
Q94AD9 Zinc finger CCCH domain-containing protein 39411e-100
O48772 Zinc finger CCCH domain-containing protein 268012e-084
Q9SWF9 Zinc finger CCCH domain-containing protein ZFN-like4615e-045
Q8GXX7 Zinc finger CCCH domain-containing protein 334526e-044
Q5NAW2 Zinc finger CCCH domain-containing protein 64293e-041

TrEMBL top hits (Blast detail)Scoree value
C0SUT1 Putative uncharacterized protein At1g04990 (Fragment)9412e-099
B9GTS9 Predicted protein6087e-061
B9IAL1 Predicted protein5943e-059
B9SSJ9 Zinc finger protein, putative5836e-058
A5AYE5 Putative uncharacterized protein5721e-056

Arabidopsis top hits (Blast detail)Scoree value
AT1G04990.2 zinc finger (CCCH-type) family protein9411e-101
AT1G04990.1 zinc finger (CCCH-type) family protein9411e-101
AT2G32930.1 ZFN2 (ZINC FINGER NUCLEASE 2); DNA binding / nuclease/ nucleic acid binding8012e-085
AT3G02830.1 ZFN1 (ZINC FINGER PROTEIN 1); DNA binding / nuclease/ nucleic acid binding4525e-045
AT2G47850.1 zinc finger (CCCH-type) family protein3997e-039

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
103  100%

Unigene MembersMember information