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Information for unigene UN28772

FASTA Sequence
Unigene ID: UN28772Length: 927 SSR 
GCGTATCTAAGGATATGATTAGGGAGGGAAATGTAGTTCATTTGCAATCGATACAGTAGTACAGATGTGATTGGGCTCCATGTTGT
ACATGACAAGATGCAGAGAAGATGTATACAACAAATATATTAGAGTATTTTCTTGAGCTTATGTTTGTTAAGGTTGCGAAGAACGA
TGTCTTCCATGGTTAACTCGCTTTATGATGCAAAGCCGGAGTCTTTTGCTGAAAGCCTCCAATCTTTCTCGTTTAGGCTTCTTCGC
ATCTGTTTCAACTCCTTTCTTCATTTTCTTCTCCTTCCTCTCCTCTTTTTCTTCTTCTTCTTGTCTAGTGGATTCTGTTGGCTTCT
GTTGTGTGTTTCCAACATCAGATTTCTCAACCTGATCGCCATGGTCAACGGTCAAGCTCTCATCTTCTTCAGAACCTCCTAGTGAA
GAGCATCTTCCCCAGCTTTCCCTGTTAGAGCTTGTGAATGAACATCCTTCTTCAAACTGATCAATAGGCATCCCCTCAGGTTCATC
AATGTTGTGATCATTGCCTTCTTCTACAAGCACGTCATCAGTATTCATAATGGGCATGGCTTCCGAAAGGAGCTCATTTGTTGGCT
TTGTGGTTAGAGAGGCAGGAGGTGCAGAAGAAGAAGAAGAACTTGCAACATCGATACATGCCGAACGAAGACCAGATATGATCTCA
TACAGAAAATTCTCGTCCAAACCAGCAGCGCTATAACTTTCAAGTTTAGATGAGCAAGCTGAAGGAACTTGAGGCGGGCGTAGAAC
ATTGTAGAAGAATATTAACACTGAGTCATAGTAAAACTGCGGCCGTGAAGAGTTGTGATCACCATCAAACTTGATGATGTTTTTGT
CTCCCGCATAGCACTTGAGAATGTGGTCAGAGTGATGAGGTTGAATGAATTTGTCTCCACTTGCCCT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_193448 esterase/lipase domain-containing protein [Arabidopsis thaliana]9823e-104
XP_002870121 hypothetical protein ARALYDRAFT_915007 [Arabidopsis lyrata subsp. lyrata]9699e-103
XP_002525239 catalytic, putative [Ricinus communis]6168e-062
NP_001118998 esterase/lipase domain-containing protein [Arabidopsis thaliana]5272e-051
CBI25864 unnamed protein product [Vitis vinifera]5111e-049

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q8GWG9 Putative uncharacterized protein At4g17150/dl4610w9822e-104
B9SGX0 Catalytic, putative6166e-062
B3H4I3 Uncharacterized protein At4g17150.25271e-051
O23560 Putative uncharacterized protein AT4g171504087e-038
C0JAF2 Putative uncharacterized protein3882e-035

Arabidopsis top hits (Blast detail)Scoree value
AT4G17150.1 unknown protein9821e-106
AT4G17150.2 unknown protein5277e-054
AT4G14290.1 LOCATED IN: plasma membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G23540.1); Has 2977 Blast hits to 1894 proteins in 536 species: Archae - 16; Bacteria - 950; Metazoa - 424; Fungi - 111; Plants - 88; Viruses - 19; Other Eukaryotes - 1369 (source: NCBI BLink).2411e-020
AT3G23540.1 LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G14290.1); Has 2970 Blast hits to 1825 proteins in 452 species: Archae - 14; Bacteria - 815; Metazoa - 445; Fungi - 204; Plants - 77; Viruses - 0; Other Eukaryotes - 1415 (source: NCBI BLink).2274e-019
AT3G23540.2 unknown protein2274e-019

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
62  67%
 
81  33%

Unigene MembersMember information