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Information for unigene UN28782

FASTA Sequence
Unigene ID: UN28782Length: 1168 SSR 
AATGAAAGTCTTTAAACTATATAGTAGCATTTGAAAAACAAAAATTAAAATTTTAACAAACTGATTTATAAATAAAATAACAAAAG
GGAGTACTAGTAGTAACAGGAGGAATATAATACCAAAATGACATTACATCGAACCTGTTCATTTTTCTATGTGATGATGACTCTCA
AGTCATCTAAAATCAGTTTTGTAGCTTTTAAATTTACCAAATACCCCTCCACTTATTCATCCTTAGTTTTTCTCTACTCTGTTCAT
AGCCAGATCGGTCCAAGGGTTACCACCTCCTCCGTTACCTGCTTCGCTCCTCCTCAAACCCAAACTCATACCCGGATCCCAACCCG
ACCCGTCGAGCATGATTCCACCAAGACCCAGCTGCATATTCGACGCCAAAAGCGAGCTAAAACTCCCACCACCACCAACACCCATC
TCCATACCTTTCACGTCTTGGTCCCCGATCGGAAACCCGTACAGCATCCGGGTCGGATCCGTATCCGGGTTGGTTTCCTTCTGTGA
ACTAGGATCCGGATCAGGGGTCTTGGCCTTCTTGTGGGAGTTGGAAGGAGAAGTAGAAGAAGAGGTGGATCGTTTAGCGTTCTTGC
GAGAACCGCCACCGACGGGGACGTTACGGAGAGCGCCGCCTTTGGTCCAGTAACGGCGACAGCTTTTGCAAAAGTGACGGGGCTGT
GAGAGGTTGTAGTTGTTGTAGTAACAGAACTTAGTGTTTGGTGAGTCACAGCGAGGACACTTTAACTGTTCTTGGTCCGGAAATTG
CGGTTGTTGTTGTTGTTGTTGCTGATGTAGTTGTTTCGCCATCATCGACTGGTAATAAGCTGCTGGATCCTGCATTTTTTTTTCTT
TACGAATAATGATCTCTTTTTTTTTCTTTTTTTCCCAGAAAATTTAATGAATTCCTGTTAAAAGACAAAGTTAAAAGATGGAATAT
TGGAGATGGCAGGTTGCAATTTAGGACAGGGGAAGAGTTAGAAAAAAGGAGGGAGATAGGAGAGTGAGCGACTTTTGAGGTTTTTA
TAGAGTGGAAGTGGTCCTTATCGCATAAATAAGACAAATTTAACACTTTCCTCTCACTAAGTTTTGAGAAAGACAGAGAGAGCGAG
AGAGAGAAGTGGAGCAGAACAGAGAGGGGGAAGAGGCAAAGAGAAGATCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_188764 Dof zinc finger protein DOF3.1 [Arabidopsis thaliana]8222e-085
AAK76521 putative Dof zinc finger protein [Arabidopsis thaliana]8193e-085
XP_002883295 hypothetical protein ARALYDRAFT_898570 [Arabidopsis lyrata subsp. lyrata]7746e-080
NP_175581 Dof zinc finger protein DOF1.7 [Arabidopsis thaliana]5237e-051
XP_002891653 hypothetical protein ARALYDRAFT_474287 [Arabidopsis lyrata subsp. lyrata]5075e-049

Swiss-Prot top hits (Blast detail)Scoree value
Q94AR6 Dof zinc finger protein DOF3.18226e-087
O82155 Dof zinc finger protein DOF1.75233e-052
Q9FZA4 Dof zinc finger protein DOF1.43503e-032
Q9ZV33 Dof zinc finger protein DOF2.23218e-029
Q39088 Dof zinc finger protein DOF3.43191e-028

TrEMBL top hits (Blast detail)Scoree value
Q1ECG2 At1g517005235e-051
B9MWQ5 F-box family protein4241e-039
Q0GLF0 Dof1 (Fragment)3953e-036
B9T7A4 Zinc finger protein, putative3911e-035
Q0GLE2 Dof10 (Fragment)3873e-035

Arabidopsis top hits (Blast detail)Scoree value
AT3G21270.1 ADOF2; DNA binding / transcription factor8234e-088
AT1G51700.1 ADOF1; DNA binding / transcription factor5233e-053
AT1G28310.2 Dof-type zinc finger domain-containing protein3522e-033
AT1G28310.1 Dof-type zinc finger domain-containing protein3503e-033
AT2G28810.1 Dof-type zinc finger domain-containing protein3217e-030

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
81  33%
 
102  67%

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